Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
U3KQE9 RNA5SP289-201ENST00000362332 137 ntBASIC1.69□□□□□ -2.14
U3KQE9 RNU6-664P-201ENST00000362381 107 ntBASIC1.69□□□□□ -2.14
U3KQE9 Y_RNA.12-201ENST00000362393 112 ntBASIC1.69□□□□□ -2.14
U3KQE9 Y_RNA.510-201ENST00000384511 114 ntBASIC1.69□□□□□ -2.14
U3KQE9 RNU6-70P-201ENST00000516438 60 ntBASIC1.69□□□□□ -2.14
U3KQE9 RNU6-1015P-201ENST00000517121 99 ntBASIC1.69□□□□□ -2.14
U3KQE9 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
U3KQE9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
U3KQE9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
U3KQE9 RNU6-681P-201ENST00000364012 104 ntBASIC1.68□□□□□ -2.14
U3KQE9 MIR221-201ENST00000385135 110 ntBASIC1.68□□□□□ -2.14
U3KQE9 Y_RNA.596-201ENST00000410462 109 ntBASIC1.68□□□□□ -2.14
U3KQE9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.68□□□□□ -2.14
U3KQE9 AC036111.3-201ENST00000526389 112 ntBASIC1.68□□□□□ -2.14
U3KQE9 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
U3KQE9 MIR5002-201ENST00000584713 97 ntBASIC1.68□□□□□ -2.14
U3KQE9 AC106800.4-201ENST00000614905 153 ntBASIC1.68□□□□□ -2.14
U3KQE9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.67□□□□□ -2.14
U3KQE9 RNU6-587P-201ENST00000391282 106 ntBASIC1.67□□□□□ -2.14
U3KQE9 MIR942-201ENST00000401111 86 ntBASIC1.67□□□□□ -2.14
U3KQE9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.67□□□□□ -2.14
U3KQE9 MIR4696-201ENST00000581431 70 ntBASIC1.67□□□□□ -2.14
U3KQE9 MIR4672-201ENST00000583126 81 ntBASIC1.67□□□□□ -2.14
U3KQE9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.67□□□□□ -2.14
U3KQE9 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
U3KQE9 RNU4-52P-201ENST00000384209 138 ntBASIC1.66□□□□□ -2.14
U3KQE9 MIR599-201ENST00000385069 95 ntBASIC1.66□□□□□ -2.14
U3KQE9 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
U3KQE9 RNU6-935P-201ENST00000410371 100 ntBASIC1.66□□□□□ -2.14
U3KQE9 RNU2-59P-201ENST00000410482 191 ntBASIC1.66□□□□□ -2.14
U3KQE9 SNORD83.1-201ENST00000411362 77 ntBASIC1.66□□□□□ -2.14
U3KQE9 RNU6-687P-201ENST00000516443 89 ntBASIC1.66□□□□□ -2.14
U3KQE9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.66□□□□□ -2.14
U3KQE9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
U3KQE9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
U3KQE9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
U3KQE9 RNU4-82P-201ENST00000362443 140 ntBASIC1.65□□□□□ -2.15
U3KQE9 Y_RNA.207-201ENST00000364142 106 ntBASIC1.65□□□□□ -2.15
U3KQE9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
U3KQE9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
U3KQE9 Y_RNA.606-201ENST00000410579 103 ntBASIC1.65□□□□□ -2.15
U3KQE9 RPS26P5-201ENST00000418544 335 ntBASIC1.65□□□□□ -2.15
U3KQE9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
U3KQE9 MIR4771-2-201ENST00000577758 74 ntBASIC1.65□□□□□ -2.15
U3KQE9 MIR4771-1-201ENST00000582617 74 ntBASIC1.65□□□□□ -2.15
U3KQE9 MIR6132-201ENST00000622083 109 ntBASIC1.65□□□□□ -2.15
U3KQE9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
U3KQE9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
U3KQE9 RNU4-53P-201ENST00000410828 140 ntBASIC1.64□□□□□ -2.15
U3KQE9 AL591704.2-201ENST00000421658 181 ntBASIC1.64□□□□□ -2.15
U3KQE9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.64□□□□□ -2.15
U3KQE9 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
U3KQE9 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
U3KQE9 RNU7-156P-201ENST00000517214 74 ntBASIC1.64□□□□□ -2.15
U3KQE9 MIR4484-201ENST00000582855 83 ntBASIC1.64□□□□□ -2.15
U3KQE9 AL645939.4-201ENST00000604495 135 ntBASIC1.64□□□□□ -2.15
U3KQE9 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
U3KQE9 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
U3KQE9 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.64□□□□□ -2.15
U3KQE9 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
U3KQE9 U6.100-201ENST00000636230 99 ntBASIC1.64□□□□□ -2.15
U3KQE9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
U3KQE9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
U3KQE9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.63□□□□□ -2.15
U3KQE9 RNU6-340P-201ENST00000364005 107 ntBASIC1.63□□□□□ -2.15
U3KQE9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.63□□□□□ -2.15
U3KQE9 SNORD115-44-201ENST00000365391 82 ntBASIC1.63□□□□□ -2.15
U3KQE9 RNA5SP37-201ENST00000365420 130 ntBASIC1.63□□□□□ -2.15
U3KQE9 U3.27-201ENST00000391237 200 ntBASIC1.63□□□□□ -2.15
U3KQE9 AL606490.4-201ENST00000423117 127 ntBASIC1.63□□□□□ -2.15
U3KQE9 AC244505.6-201ENST00000452829 130 ntBASIC1.63□□□□□ -2.15
U3KQE9 snoU13.21-201ENST00000459368 105 ntBASIC1.63□□□□□ -2.15
U3KQE9 AL096840.1-201ENST00000603287 93 ntBASIC1.63□□□□□ -2.15
U3KQE9 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
U3KQE9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
U3KQE9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
U3KQE9 SNORA80D-201ENST00000384488 135 ntBASIC1.62□□□□□ -2.15
U3KQE9 SNORA75.2-201ENST00000391138 150 ntBASIC1.62□□□□□ -2.15
U3KQE9 SNORA75.3-201ENST00000391231 150 ntBASIC1.62□□□□□ -2.15
U3KQE9 MIR938-201ENST00000401216 83 ntBASIC1.62□□□□□ -2.15
U3KQE9 AC048334.1-201ENST00000477975 159 ntBASIC1.62□□□□□ -2.15
U3KQE9 AC097510.1-201ENST00000510945 133 ntBASIC1.62□□□□□ -2.15
U3KQE9 SNORA31.2-201ENST00000516019 134 ntBASIC1.62□□□□□ -2.15
U3KQE9 MIR4676-201ENST00000583078 72 ntBASIC1.62□□□□□ -2.15
U3KQE9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
U3KQE9 SNORA8.1-201ENST00000384250 140 ntBASIC1.61□□□□□ -2.15
U3KQE9 RNU6-364P-201ENST00000384387 107 ntBASIC1.61□□□□□ -2.15
U3KQE9 RNU6-535P-201ENST00000384722 107 ntBASIC1.61□□□□□ -2.15
U3KQE9 SNORD90-201ENST00000391145 111 ntBASIC1.61□□□□□ -2.15
U3KQE9 AL356320.1-201ENST00000429616 163 ntBASIC1.61□□□□□ -2.15
U3KQE9 AC025033.1-201ENST00000463883 194 ntBASIC1.61□□□□□ -2.15
U3KQE9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
U3KQE9 SNORA24B-201ENST00000384176 131 ntBASIC1.6□□□□□ -2.15
U3KQE9 RNU6-301P-201ENST00000384277 107 ntBASIC1.6□□□□□ -2.15
U3KQE9 RNU6-291P-201ENST00000384720 107 ntBASIC1.6□□□□□ -2.15
U3KQE9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
U3KQE9 RNU7-21P-201ENST00000459430 62 ntBASIC1.6□□□□□ -2.15
U3KQE9 AC125388.1-201ENST00000459631 156 ntBASIC1.6□□□□□ -2.15
U3KQE9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms