Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC093423.1-201ENST00000440817 142 ntBASIC-0.54□□□□□ -2.5
LRRC42Q9Y546 MIR4432-201ENST00000581823 84 ntBASIC-0.54□□□□□ -2.5
LRRC42Q9Y546 MIR4263-201ENST00000584745 83 ntBASIC-0.54□□□□□ -2.5
LRRC42Q9Y546 AC009779.6-201ENST00000603972 165 ntBASIC-0.54□□□□□ -2.5
LRRC42Q9Y546 MIR376B-201ENST00000614515 100 ntBASIC-0.54□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 RNU6-571P-201ENST00000384128 107 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 MIR519E-201ENST00000385075 84 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 AL603914.1-201ENST00000401964 204 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 RNU6-284P-201ENST00000411105 106 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 MTND2P23-201ENST00000422990 651 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 RNU7-106P-201ENST00000459514 67 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 AL117351.2-201ENST00000513571 157 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 RNU6-175P-201ENST00000516896 107 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 MIR548AE1-201ENST00000583292 70 ntBASIC-0.55□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.56□□□□□ -2.5
LRRC42Q9Y546 AC069503.3-201ENST00000618674 145 ntBASIC-0.56□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 RNU6-867P-201ENST00000364956 107 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 RNU6-480P-201ENST00000384332 107 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 RNU6-616P-201ENST00000384353 107 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 SNORA75.5-201ENST00000391291 81 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 SNORD58.1-201ENST00000391313 66 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 SNORD127-201ENST00000458892 86 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 AC044792.1-201ENST00000593294 196 ntBASIC-0.57□□□□□ -2.5
LRRC42Q9Y546 SNORD115-35-201ENST00000365122 82 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 MIR539-201ENST00000365690 78 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 MIR181B2-201ENST00000385004 89 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 MIR329-2-201ENST00000385029 84 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 MIR617-201ENST00000385030 97 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 AC114755.3-201ENST00000481111 251 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 RNU6-850P-201ENST00000516934 103 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 YWHAEP2-201ENST00000580066 112 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 FTX_2.1-201ENST00000618816 94 ntBASIC-0.58□□□□□ -2.5
LRRC42Q9Y546 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 RNU6-508P-201ENST00000363231 103 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 SNORD27-201ENST00000363981 72 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 SNORD115-44-201ENST00000365391 82 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 AC107027.2-201ENST00000512197 115 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 RNY4P20-201ENST00000516678 93 ntBASIC-0.59□□□□□ -2.5
LRRC42Q9Y546 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 RNA5SP98-201ENST00000363158 137 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 MIR34C-201ENST00000384831 77 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 RNU6-918P-201ENST00000391219 106 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 IGLVI-20-201ENST00000519296 130 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 AC087741.2-201ENST00000619415 172 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 uc_338.10-201ENST00000621872 182 ntBASIC-0.6□□□□□ -2.51
LRRC42Q9Y546 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 MIR516A2-201ENST00000384888 90 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 MIR516A1-201ENST00000385033 90 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 RNU6-588P-201ENST00000410281 105 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 RNA5SP480-201ENST00000516840 109 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 U4.1-201ENST00000620349 87 ntBASIC-0.61□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 RNY1P11-201ENST00000363759 113 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 SNORD114-29-201ENST00000364819 70 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 SNORA51.5-201ENST00000384126 131 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 MIR2113-201ENST00000459007 91 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 AL117187.1-201ENST00000555482 181 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 MIR4460-201ENST00000577862 86 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 AP001094.1-201ENST00000579805 193 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 MIR4645-201ENST00000583158 77 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 MIR6844-201ENST00000637122 62 ntBASIC-0.62□□□□□ -2.51
LRRC42Q9Y546 SNORD114-31-201ENST00000363219 75 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 RNU6-309P-201ENST00000364573 106 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 RNU6-154P-201ENST00000384306 106 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 RNU6-455P-201ENST00000384681 107 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 MIR9-2-201ENST00000384838 87 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 MIR3646-201ENST00000578301 84 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 MIR8064-201ENST00000612863 90 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 MIR548AZ-201ENST00000616567 95 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 uc_338.36-201ENST00000622331 158 ntBASIC-0.63□□□□□ -2.51
LRRC42Q9Y546 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.64□□□□□ -2.51
LRRC42Q9Y546 RNU6-797P-201ENST00000363101 109 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms