Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNU6-733P-201ENST00000410759 104 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 RNU7-56P-201ENST00000458744 62 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 RNU7-102P-201ENST00000458948 62 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 RNU6-589P-201ENST00000516485 107 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 AP003327.1-201ENST00000529684 127 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 MIR8066-201ENST00000617280 78 ntBASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
CCM2LQ9NUG4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
CCM2LQ9NUG4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCM2LQ9NUG4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.09□□□□□ -2.23
CCM2LQ9NUG4 RNU6-1107P-201ENST00000364817 104 ntBASIC1.09□□□□□ -2.23
CCM2LQ9NUG4 MIR605-201ENST00000385078 83 ntBASIC1.09□□□□□ -2.23
CCM2LQ9NUG4 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
CCM2LQ9NUG4 RNU6-1018P-201ENST00000516577 106 ntBASIC1.09□□□□□ -2.23
CCM2LQ9NUG4 U8.6-201ENST00000364939 135 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 RNU6-44P-201ENST00000384045 107 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 SNORD38.2-201ENST00000384470 69 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 RNY4P18-201ENST00000391107 89 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 AL035461.1-201ENST00000421490 332 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 RNU6-919P-201ENST00000516731 104 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 SNORA25.16-201ENST00000516741 121 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 AC068339.1-201ENST00000526965 141 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 uc_338.28-201ENST00000612082 187 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 MIR376B-201ENST00000614515 100 ntBASIC1.08□□□□□ -2.24
CCM2LQ9NUG4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCM2LQ9NUG4 RNU6-1313P-201ENST00000362622 102 ntBASIC1.07□□□□□ -2.24
CCM2LQ9NUG4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.07□□□□□ -2.24
CCM2LQ9NUG4 AL512310.12-203ENST00000640543 90 ntBASIC1.07□□□□□ -2.24
CCM2LQ9NUG4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 RNU6-679P-201ENST00000391003 106 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 AL353813.1-201ENST00000440700 253 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 RNA5SP436-201ENST00000516020 115 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 RNU6-531P-201ENST00000516694 104 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 MIR5009-201ENST00000578736 100 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 AC090897.1-201ENST00000580909 226 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
CCM2LQ9NUG4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.05□□□□□ -2.24
CCM2LQ9NUG4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CCM2LQ9NUG4 RNU6-1014P-201ENST00000383940 103 ntBASIC1.05□□□□□ -2.24
CCM2LQ9NUG4 MIR34C-201ENST00000384831 77 ntBASIC1.05□□□□□ -2.24
CCM2LQ9NUG4 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
CCM2LQ9NUG4 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
CCM2LQ9NUG4 AC008608.1-201ENST00000603910 127 ntBASIC1.05□□□□□ -2.24
CCM2LQ9NUG4 Y_RNA.360-201ENST00000365512 102 ntBASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 MIR573-201ENST00000384964 99 ntBASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 RNU6-448P-201ENST00000517052 107 ntBASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 AC141557.1-201ENST00000540982 400 ntBASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 MIR4694-201ENST00000578534 80 ntBASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
CCM2LQ9NUG4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCM2LQ9NUG4 MIR101-2-201ENST00000362195 79 ntBASIC1.03□□□□□ -2.24
CCM2LQ9NUG4 SNORD99-201ENST00000408612 74 ntBASIC1.03□□□□□ -2.24
CCM2LQ9NUG4 RNU6-554P-201ENST00000410466 106 ntBASIC1.03□□□□□ -2.24
CCM2LQ9NUG4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.03□□□□□ -2.24
CCM2LQ9NUG4 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
CCM2LQ9NUG4 Y_RNA.163-201ENST00000363702 113 ntBASIC1.02□□□□□ -2.25
CCM2LQ9NUG4 Y_RNA.377-201ENST00000365644 108 ntBASIC1.02□□□□□ -2.25
CCM2LQ9NUG4 RNU6-1201P-201ENST00000384227 107 ntBASIC1.02□□□□□ -2.25
CCM2LQ9NUG4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.02□□□□□ -2.25
CCM2LQ9NUG4 SNORA19.1-201ENST00000410656 129 ntBASIC1.02□□□□□ -2.25
CCM2LQ9NUG4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.02□□□□□ -2.25
CCM2LQ9NUG4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
CCM2LQ9NUG4 HSBP1P2-201ENST00000299671 229 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 MIR450A1-201ENST00000362262 91 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 SNORD38.1-201ENST00000363863 68 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 RNU6-106P-201ENST00000384405 107 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 RNY1P4-201ENST00000384595 115 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 MIR577-201ENST00000385196 96 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 AC004941.2-201ENST00000427009 228 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 MIR4500-201ENST00000579472 76 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 AC013244.2-201ENST00000603396 103 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 AC096720.1-201ENST00000604441 183 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 AL442128.1-201ENST00000615151 90 ntBASIC1.01□□□□□ -2.25
CCM2LQ9NUG4 RNY3P2-201ENST00000362918 102 ntBASIC1□□□□□ -2.25
CCM2LQ9NUG4 Y_RNA.247-201ENST00000364500 92 ntBASIC1□□□□□ -2.25
CCM2LQ9NUG4 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
CCM2LQ9NUG4 RNU7-10P-201ENST00000607194 63 ntBASIC1□□□□□ -2.25
CCM2LQ9NUG4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.99□□□□□ -2.25
CCM2LQ9NUG4 MIR1302-5-201ENST00000408164 150 ntBASIC0.99□□□□□ -2.25
CCM2LQ9NUG4 SNORD100-201ENST00000408573 76 ntBASIC0.99□□□□□ -2.25
CCM2LQ9NUG4 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
CCM2LQ9NUG4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 SNORA51.5-201ENST00000384126 131 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 RNU6-571P-201ENST00000384128 107 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 MIR608-201ENST00000384820 100 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 AC244098.3-201ENST00000424803 96 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 AC002350.1-201ENST00000490759 375 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 RNU6-1006P-201ENST00000516998 103 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 MIR3613-201ENST00000579844 87 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 MIR548H5-201ENST00000580314 60 ntBASIC0.98□□□□□ -2.25
CCM2LQ9NUG4 Y_RNA.10-201ENST00000362371 110 ntBASIC0.97□□□□□ -2.25
CCM2LQ9NUG4 Y_RNA.56-201ENST00000362798 112 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms