Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-138P-201ENST00000515952 107 ntBASIC-0.65□□□□□ -2.51
TREX1Q9NSU2 AP001328.1-201ENST00000528550 176 ntBASIC-0.65□□□□□ -2.51
TREX1Q9NSU2 MIR3920-201ENST00000581751 86 ntBASIC-0.65□□□□□ -2.51
TREX1Q9NSU2 MIR409-201ENST00000362237 79 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 RNU1-141P-201ENST00000364623 158 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 MIR539-201ENST00000365690 78 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 RNU6-900P-201ENST00000384498 102 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 RNU6-578P-201ENST00000390980 103 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 MIR4282-201ENST00000583613 67 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 MIR4473-201ENST00000583731 91 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 MIR6851-201ENST00000617060 67 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 uc_338.10-201ENST00000621872 182 ntBASIC-0.66□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 SNORD114-29-201ENST00000364819 70 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 AL445193.1-201ENST00000441183 141 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 SNORA13-201ENST00000458790 133 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 RNU7-195P-201ENST00000458793 62 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 RNU7-48P-201ENST00000458875 63 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 RNU2-35P-201ENST00000516446 142 ntBASIC-0.67□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 RNA5SP331-201ENST00000364986 107 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 SNORD83B-201ENST00000386745 93 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 MIR548I2-201ENST00000408348 149 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 SNORD38.3-201ENST00000516599 73 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 IGKV1-22-201ENST00000524313 326 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 RNY1P9-201ENST00000532431 109 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 MIR4680-201ENST00000580906 66 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 RNU6-86P-201ENST00000606534 107 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 AC069503.3-201ENST00000618674 145 ntBASIC-0.68□□□□□ -2.52
TREX1Q9NSU2 MTND4P29-201ENST00000503122 1372 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 RNU6-502P-201ENST00000362419 108 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 RNU6-524P-201ENST00000384270 107 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 RNU6-721P-201ENST00000410155 105 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 SNORD63B-201ENST00000411005 70 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 AC093423.1-201ENST00000440817 142 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 MIR548AE1-201ENST00000583292 70 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 RNU2-4P-201ENST00000606190 192 ntBASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.69□□□□□ -2.52
TREX1Q9NSU2 SNORD115-44-201ENST00000365391 82 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 RNU6-643P-201ENST00000384018 107 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 RNU6-713P-201ENST00000384761 107 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 MIR206-201ENST00000384872 86 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 RNU4-69P-201ENST00000410677 143 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 MTND5P40-201ENST00000559945 246 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 YWHAEP2-201ENST00000580066 112 ntBASIC-0.7□□□□□ -2.52
TREX1Q9NSU2 RNU6-901P-201ENST00000384593 106 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 RNU7-164P-201ENST00000459221 62 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 MIR1270-201ENST00000459320 83 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 RNU7-55P-201ENST00000459426 62 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 RNY3P16-201ENST00000516338 101 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 AC138907.4-201ENST00000570107 226 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 AC021443.1-201ENST00000604478 211 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 AL160413.1-201ENST00000622780 310 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 AC134503.1-201ENST00000633048 54 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 MTND5P18-201ENST00000445624 1801 ntBASIC-0.71□□□□□ -2.52
TREX1Q9NSU2 SNORD114-25-201ENST00000363742 72 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 RNU6-154P-201ENST00000384306 106 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 SNORD77B-201ENST00000391112 67 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 RNA5SP266-201ENST00000410273 108 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 MTATP6P23-201ENST00000440153 476 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 AL500527.2-201ENST00000454105 95 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 RNU6-240P-201ENST00000516098 97 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 SCARNA17-201ENST00000516183 144 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 AP000676.1-201ENST00000533307 52 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 MIR3179-1-201ENST00000578940 84 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 MIR3179-2-201ENST00000579107 84 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 MIR3179-3-201ENST00000579566 84 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 AC011603.4-201ENST00000611325 277 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 MIR3179-4-201ENST00000617599 84 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 AP001362.1-201ENST00000625165 124 ntBASIC-0.72□□□□□ -2.52
TREX1Q9NSU2 MIR335-201ENST00000362173 94 ntBASIC-0.73□□□□□ -2.53
TREX1Q9NSU2 RNU6-170P-201ENST00000362832 104 ntBASIC-0.73□□□□□ -2.53
TREX1Q9NSU2 RNY3P14-201ENST00000384309 102 ntBASIC-0.73□□□□□ -2.53
TREX1Q9NSU2 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.73□□□□□ -2.53
TREX1Q9NSU2 MIR519E-201ENST00000385075 84 ntBASIC-0.73□□□□□ -2.53
TREX1Q9NSU2 MIR518B-201ENST00000385127 83 ntBASIC-0.73□□□□□ -2.53
TREX1Q9NSU2 RNU6-493P-201ENST00000391321 108 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms