Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC020891.4-201ENST00000605745 93 ntBASIC1.27□□□□□ -2.21
TIMP4Q99727 SNORD113.3-201ENST00000364630 78 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 RNU1-36P-201ENST00000365130 165 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 RNU6-934P-201ENST00000365154 107 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 MIR450A2-201ENST00000385022 100 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 Y_RNA.593-201ENST00000410292 98 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 RNU6-531P-201ENST00000516694 104 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 AC036111.3-201ENST00000526389 112 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 MIR4781-201ENST00000585250 76 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 IGLL4P-201ENST00000614590 133 ntBASIC1.26□□□□□ -2.21
TIMP4Q99727 HSBP1P2-201ENST00000299671 229 ntBASIC1.25□□□□□ -2.21
TIMP4Q99727 SNORD116-10-201ENST00000363791 102 ntBASIC1.25□□□□□ -2.21
TIMP4Q99727 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
TIMP4Q99727 RNU6-402P-201ENST00000410678 103 ntBASIC1.25□□□□□ -2.21
TIMP4Q99727 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
TIMP4Q99727 RNU7-185P-201ENST00000459215 60 ntBASIC1.25□□□□□ -2.21
TIMP4Q99727 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.25□□□□□ -2.21
TIMP4Q99727 Y_RNA.676-201ENST00000516393 96 ntBASIC1.25□□□□□ -2.21
TIMP4Q99727 RNU6-1125P-201ENST00000363601 107 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 RNY1P1-201ENST00000364372 112 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 Y_RNA.327-201ENST00000365201 102 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 RNU6-480P-201ENST00000384332 107 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 SNORD116-22-201ENST00000384430 92 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 RNY1P4-201ENST00000384595 115 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 RNU4-83P-201ENST00000410863 133 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 RNU6-850P-201ENST00000516934 103 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 AL513043.2-201ENST00000573941 143 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 MIR4771-2-201ENST00000577758 74 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 MIR4771-1-201ENST00000582617 74 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 AC025521.1-201ENST00000621624 286 ntBASIC1.24□□□□□ -2.21
TIMP4Q99727 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TIMP4Q99727 Y_RNA.57-201ENST00000362806 113 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 RNA5SP173-201ENST00000364857 136 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 RNU6-573P-201ENST00000383938 106 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 Y_RNA.588-201ENST00000391254 102 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 MIR1257-201ENST00000408490 117 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 Y_RNA.609-201ENST00000410669 89 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 RN7SKP12-201ENST00000516275 143 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 RNU6-267P-201ENST00000516714 103 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 AL157834.3-201ENST00000615543 103 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 AL353770.2-201ENST00000620024 78 ntBASIC1.23□□□□□ -2.21
TIMP4Q99727 MIR337-201ENST00000362281 93 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 Y_RNA.73-201ENST00000362910 113 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 RNU4-58P-201ENST00000363192 141 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 RNU6-820P-201ENST00000384273 107 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 SNORA80D-201ENST00000384488 135 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 RNU7-21P-201ENST00000459430 62 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 AC013244.2-201ENST00000603396 103 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 AC008163.1-202ENST00000636004 2889 ntBASIC1.22□□□□□ -2.21
TIMP4Q99727 Y_RNA.13-201ENST00000362403 112 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 RNU6-592P-201ENST00000411333 103 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 SNRPGP12-201ENST00000449481 213 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 MIR4668-201ENST00000582284 70 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 AC106800.4-201ENST00000614905 153 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 MIR8066-201ENST00000617280 78 ntBASIC1.21□□□□□ -2.22
TIMP4Q99727 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TIMP4Q99727 Y_RNA.191-201ENST00000363972 113 ntBASIC1.2□□□□□ -2.22
TIMP4Q99727 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TIMP4Q99727 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
TIMP4Q99727 RNU6-994P-201ENST00000410507 111 ntBASIC1.2□□□□□ -2.22
TIMP4Q99727 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
TIMP4Q99727 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
TIMP4Q99727 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
TIMP4Q99727 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
TIMP4Q99727 MIR101-2-201ENST00000362195 79 ntBASIC1.19□□□□□ -2.22
TIMP4Q99727 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
TIMP4Q99727 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
TIMP4Q99727 RNU6-571P-201ENST00000384128 107 ntBASIC1.19□□□□□ -2.22
TIMP4Q99727 MIR516A2-201ENST00000384888 90 ntBASIC1.19□□□□□ -2.22
TIMP4Q99727 MIR516A1-201ENST00000385033 90 ntBASIC1.19□□□□□ -2.22
TIMP4Q99727 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
TIMP4Q99727 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TIMP4Q99727 RNU6-497P-201ENST00000365316 104 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 MIR125B2-201ENST00000385128 89 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 Y_RNA.620-201ENST00000411009 88 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 RPS26P5-201ENST00000418544 335 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 AC022137.1-201ENST00000483735 151 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 RNU7-156P-201ENST00000517214 74 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 MIR4676-201ENST00000583078 72 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 MIR6082-201ENST00000613604 109 ntBASIC1.18□□□□□ -2.22
TIMP4Q99727 RNU6-219P-201ENST00000364728 107 ntBASIC1.17□□□□□ -2.22
TIMP4Q99727 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
TIMP4Q99727 RNU7-106P-201ENST00000459514 67 ntBASIC1.17□□□□□ -2.22
TIMP4Q99727 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
TIMP4Q99727 RNU6-1194P-201ENST00000516208 104 ntBASIC1.17□□□□□ -2.22
TIMP4Q99727 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
TIMP4Q99727 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
TIMP4Q99727 RNU6-364P-201ENST00000384387 107 ntBASIC1.16□□□□□ -2.22
TIMP4Q99727 MIR100-201ENST00000385259 80 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 251.4 ms