Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.57□□□□□ -2.16
CHAMP1Q96JM3 AC109327.2-201ENST00000448339 378 ntBASIC1.57□□□□□ -2.16
CHAMP1Q96JM3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.57□□□□□ -2.16
CHAMP1Q96JM3 SNORD79.1-201ENST00000516069 84 ntBASIC1.57□□□□□ -2.16
CHAMP1Q96JM3 AC096720.1-201ENST00000604441 183 ntBASIC1.57□□□□□ -2.16
CHAMP1Q96JM3 AC008163.1-202ENST00000636004 2889 ntBASIC1.57□□□□□ -2.16
CHAMP1Q96JM3 RNU6-1131P-201ENST00000364955 107 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 MIR216A-201ENST00000385063 110 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 RNU6-910P-201ENST00000390844 107 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 MIR548J-201ENST00000408833 112 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 RPS29P28-201ENST00000446439 141 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 RNU7-61P-201ENST00000515897 61 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 MIR4439-201ENST00000583746 80 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 MALAT1.1-201ENST00000618249 95 ntBASIC1.56□□□□□ -2.16
CHAMP1Q96JM3 HSBP1P2-201ENST00000299671 229 ntBASIC1.55□□□□□ -2.16
CHAMP1Q96JM3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
CHAMP1Q96JM3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.55□□□□□ -2.16
CHAMP1Q96JM3 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
CHAMP1Q96JM3 AC004223.1-201ENST00000479840 271 ntBASIC1.55□□□□□ -2.16
CHAMP1Q96JM3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.55□□□□□ -2.16
CHAMP1Q96JM3 AC106800.4-201ENST00000614905 153 ntBASIC1.55□□□□□ -2.16
CHAMP1Q96JM3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.54□□□□□ -2.16
CHAMP1Q96JM3 Y_RNA.290-201ENST00000364879 114 ntBASIC1.54□□□□□ -2.16
CHAMP1Q96JM3 SNORA80D-201ENST00000384488 135 ntBASIC1.54□□□□□ -2.16
CHAMP1Q96JM3 MIR548G-201ENST00000408442 89 ntBASIC1.54□□□□□ -2.16
CHAMP1Q96JM3 AL591704.2-201ENST00000421658 181 ntBASIC1.54□□□□□ -2.16
CHAMP1Q96JM3 MIR4491-201ENST00000581087 68 ntBASIC1.54□□□□□ -2.16
CHAMP1Q96JM3 MIR4679-1-201ENST00000637619 75 ntBASIC1.54□□□□□ -2.16
CHAMP1Q96JM3 RNA5SP133-201ENST00000363368 119 ntBASIC1.53□□□□□ -2.16
CHAMP1Q96JM3 RNU1-36P-201ENST00000365130 165 ntBASIC1.53□□□□□ -2.16
CHAMP1Q96JM3 RNY1P7-201ENST00000384743 110 ntBASIC1.53□□□□□ -2.16
CHAMP1Q96JM3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.53□□□□□ -2.16
CHAMP1Q96JM3 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
CHAMP1Q96JM3 RNU6-90P-201ENST00000606352 106 ntBASIC1.53□□□□□ -2.16
CHAMP1Q96JM3 U6.109-201ENST00000636749 87 ntBASIC1.53□□□□□ -2.16
CHAMP1Q96JM3 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 SNORD114-27-201ENST00000363766 70 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 SNORD111-201ENST00000408139 94 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 SNORD83.1-201ENST00000411362 77 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 RNU7-185P-201ENST00000459215 60 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 AC090897.1-201ENST00000580909 226 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 RNU6-86P-201ENST00000606534 107 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 U7.3-201ENST00000616123 62 ntBASIC1.52□□□□□ -2.17
CHAMP1Q96JM3 RNU6-369P-201ENST00000362515 102 ntBASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 RNU1-93P-201ENST00000364704 169 ntBASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 RNU6-813P-201ENST00000384691 107 ntBASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 RNA5SP436-201ENST00000516020 115 ntBASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 AC023827.1-201ENST00000569247 97 ntBASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 AC020891.4-201ENST00000605745 93 ntBASIC1.51□□□□□ -2.17
CHAMP1Q96JM3 RNU6-1244P-201ENST00000363614 108 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 RNU6-934P-201ENST00000365154 107 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 SNORD93-201ENST00000408813 74 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 RNU7-90P-201ENST00000459216 62 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 RNU6-844P-201ENST00000517175 102 ntBASIC1.5□□□□□ -2.17
CHAMP1Q96JM3 SNORD38.2-201ENST00000384470 69 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 RNU6-887P-201ENST00000410660 100 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 AC015818.7-201ENST00000428754 109 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 AC087499.7-201ENST00000441958 109 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 SNORA25.16-201ENST00000516741 121 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 MIR4500-201ENST00000579472 76 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 AC006254.2-201ENST00000603259 279 ntBASIC1.49□□□□□ -2.17
CHAMP1Q96JM3 AC023934.1-201ENST00000574529 2389 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 RNA5SP327-201ENST00000362494 101 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 Y_RNA.220-201ENST00000364244 109 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 RNU6-294P-201ENST00000364999 102 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 RNU6-972P-201ENST00000391208 107 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 SPINT5P-201ENST00000448174 155 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 SNRPGP12-201ENST00000449481 213 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 RNU6-162P-201ENST00000516228 103 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 RNU7-40P-201ENST00000516397 64 ntBASIC1.48□□□□□ -2.17
CHAMP1Q96JM3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 SNORD58A-201ENST00000383875 65 ntBASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 RNU6-531P-201ENST00000516694 104 ntBASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 MTND5P40-201ENST00000559945 246 ntBASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 AC103810.7-201ENST00000607821 91 ntBASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.47□□□□□ -2.17
CHAMP1Q96JM3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 MIR193B-201ENST00000384907 83 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 RNU4-83P-201ENST00000410863 133 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 RPS26P5-201ENST00000418544 335 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 AC002429.1-201ENST00000437672 148 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 MIR4771-2-201ENST00000577758 74 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 MIR4771-1-201ENST00000582617 74 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 MIR8066-201ENST00000617280 78 ntBASIC1.46□□□□□ -2.18
CHAMP1Q96JM3 MIR125B2-201ENST00000385128 89 ntBASIC1.45□□□□□ -2.18
CHAMP1Q96JM3 MIR1257-201ENST00000408490 117 ntBASIC1.45□□□□□ -2.18
CHAMP1Q96JM3 BX276092.1-201ENST00000427368 251 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 290.9 ms