Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR5009-201ENST00000578736 100 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 MIR4500-201ENST00000579472 76 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 AP001362.1-201ENST00000625165 124 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 AL512310.12-203ENST00000640543 90 ntBASIC0.93□□□□□ -2.26
VPS50Q96JG6 SNORD114-27-201ENST00000363766 70 ntBASIC0.92□□□□□ -2.26
VPS50Q96JG6 MIR1912-201ENST00000410389 80 ntBASIC0.92□□□□□ -2.26
VPS50Q96JG6 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
VPS50Q96JG6 RNU6-1006P-201ENST00000516998 103 ntBASIC0.92□□□□□ -2.26
VPS50Q96JG6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS50Q96JG6 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
VPS50Q96JG6 RNU6-1313P-201ENST00000362622 102 ntBASIC0.91□□□□□ -2.26
VPS50Q96JG6 RNU6-1014P-201ENST00000383940 103 ntBASIC0.91□□□□□ -2.26
VPS50Q96JG6 BX276092.1-201ENST00000427368 251 ntBASIC0.91□□□□□ -2.26
VPS50Q96JG6 Y_RNA.709-201ENST00000516952 92 ntBASIC0.91□□□□□ -2.26
VPS50Q96JG6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS50Q96JG6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
VPS50Q96JG6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
VPS50Q96JG6 RNU4-58P-201ENST00000363192 141 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 Y_RNA.323-201ENST00000365157 109 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 RNU6-215P-201ENST00000365169 102 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 Y_RNA.355-201ENST00000365462 98 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 RNU6-1201P-201ENST00000384227 107 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 MIR577-201ENST00000385196 96 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 RNY4P18-201ENST00000391107 89 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 AC244098.3-201ENST00000424803 96 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 RNU6-765P-201ENST00000516916 99 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 AC011195.1-201ENST00000578177 177 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 MIR3613-201ENST00000579844 87 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 AC025627.3-201ENST00000582078 182 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
VPS50Q96JG6 MIR96-201ENST00000362288 78 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 RNU6-412P-201ENST00000516434 106 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 RNU6-1018P-201ENST00000516577 106 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 RNU6-448P-201ENST00000517052 107 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 AL353765.1-201ENST00000605514 183 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
VPS50Q96JG6 Y_RNA.118-201ENST00000363300 101 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 RNU6-291P-201ENST00000384720 107 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 MIR573-201ENST00000384964 99 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 SNORA19.1-201ENST00000410656 129 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 RNU6-1223P-201ENST00000517124 104 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
VPS50Q96JG6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 RNA5SP245-201ENST00000364239 121 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 AC002350.1-201ENST00000490759 375 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 RNU6-1194P-201ENST00000516208 104 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 uc_338.28-201ENST00000612082 187 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 AL442128.1-201ENST00000615151 90 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.87□□□□□ -2.27
VPS50Q96JG6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
VPS50Q96JG6 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 RNU6-832P-201ENST00000363319 107 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 RNU6-106P-201ENST00000384405 107 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 RNU6-535P-201ENST00000384722 107 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 SNORD100-201ENST00000408573 76 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 RNU6-554P-201ENST00000410466 106 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 MIR4694-201ENST00000578534 80 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 MIR3612-201ENST00000579753 87 ntBASIC0.86□□□□□ -2.27
VPS50Q96JG6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.85□□□□□ -2.27
VPS50Q96JG6 SNORA63.4-201ENST00000362763 126 ntBASIC0.85□□□□□ -2.27
VPS50Q96JG6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
VPS50Q96JG6 RNU6-44P-201ENST00000384045 107 ntBASIC0.85□□□□□ -2.27
VPS50Q96JG6 RPS29P1-201ENST00000465274 159 ntBASIC0.85□□□□□ -2.27
VPS50Q96JG6 SNORA31.14-201ENST00000516728 116 ntBASIC0.85□□□□□ -2.27
VPS50Q96JG6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS50Q96JG6 MIR101-2-201ENST00000362195 79 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 RNY3P2-201ENST00000362918 102 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 Y_RNA.163-201ENST00000363702 113 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 SNORD38.1-201ENST00000363863 68 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS50Q96JG6 RNU6-919P-201ENST00000516731 104 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 AP003327.1-201ENST00000529684 127 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 AC141557.1-201ENST00000540982 400 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 MTND5P40-201ENST00000559945 246 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 uc_338.16-201ENST00000621804 95 ntBASIC0.84□□□□□ -2.27
VPS50Q96JG6 Y_RNA.377-201ENST00000365644 108 ntBASIC0.83□□□□□ -2.28
VPS50Q96JG6 RNY1P8-201ENST00000383970 114 ntBASIC0.83□□□□□ -2.28
VPS50Q96JG6 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
VPS50Q96JG6 AL035461.1-201ENST00000421490 332 ntBASIC0.83□□□□□ -2.28
VPS50Q96JG6 SPINT5P-201ENST00000448174 155 ntBASIC0.83□□□□□ -2.28
VPS50Q96JG6 AC091304.10-201ENST00000641554 121 ntBASIC0.83□□□□□ -2.28
VPS50Q96JG6 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
VPS50Q96JG6 MIR644A-201ENST00000385262 94 ntBASIC0.82□□□□□ -2.28
VPS50Q96JG6 MIR548G-201ENST00000408442 89 ntBASIC0.82□□□□□ -2.28
VPS50Q96JG6 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
VPS50Q96JG6 SNRPGP12-201ENST00000449481 213 ntBASIC0.82□□□□□ -2.28
VPS50Q96JG6 TRAJ51-201ENST00000504127 63 ntBASIC0.82□□□□□ -2.28
VPS50Q96JG6 RNU6-850P-201ENST00000516934 103 ntBASIC0.82□□□□□ -2.28
VPS50Q96JG6 MIR18A-201ENST00000362310 71 ntBASIC0.81□□□□□ -2.28
VPS50Q96JG6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms