Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 Y_RNA.42-201ENST00000362660 108 ntBASIC0.92□□□□□ -2.26
COPAP53621 Y_RNA.49-201ENST00000362714 112 ntBASIC0.92□□□□□ -2.26
COPAP53621 Y_RNA.85-201ENST00000363014 111 ntBASIC0.92□□□□□ -2.26
COPAP53621 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
COPAP53621 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
COPAP53621 MIR548I2-201ENST00000408348 149 ntBASIC0.92□□□□□ -2.26
COPAP53621 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
COPAP53621 AL035470.1-201ENST00000622571 220 ntBASIC0.92□□□□□ -2.26
COPAP53621 Y_RNA.119-201ENST00000363301 96 ntBASIC0.91□□□□□ -2.26
COPAP53621 Y_RNA.273-201ENST00000364703 102 ntBASIC0.91□□□□□ -2.26
COPAP53621 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COPAP53621 Y_RNA.549-201ENST00000384657 102 ntBASIC0.91□□□□□ -2.26
COPAP53621 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
COPAP53621 RNU6-531P-201ENST00000516694 104 ntBASIC0.91□□□□□ -2.26
COPAP53621 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
COPAP53621 AC008608.1-201ENST00000603910 127 ntBASIC0.91□□□□□ -2.26
COPAP53621 AL512310.12-203ENST00000640543 90 ntBASIC0.91□□□□□ -2.26
COPAP53621 Y_RNA.35-201ENST00000362601 101 ntBASIC0.9□□□□□ -2.27
COPAP53621 Y_RNA.291-201ENST00000364886 113 ntBASIC0.9□□□□□ -2.27
COPAP53621 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
COPAP53621 RNU6-1307P-201ENST00000391012 103 ntBASIC0.9□□□□□ -2.27
COPAP53621 RNU6-733P-201ENST00000410759 104 ntBASIC0.9□□□□□ -2.27
COPAP53621 RNU6-1194P-201ENST00000516208 104 ntBASIC0.9□□□□□ -2.27
COPAP53621 RNU6-448P-201ENST00000517052 107 ntBASIC0.9□□□□□ -2.27
COPAP53621 AP003327.1-201ENST00000529684 127 ntBASIC0.9□□□□□ -2.27
COPAP53621 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.9□□□□□ -2.27
COPAP53621 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
COPAP53621 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
COPAP53621 Y_RNA.281-201ENST00000364774 94 ntBASIC0.89□□□□□ -2.27
COPAP53621 SNORD38.2-201ENST00000384470 69 ntBASIC0.89□□□□□ -2.27
COPAP53621 Y_RNA.629-201ENST00000411368 105 ntBASIC0.89□□□□□ -2.27
COPAP53621 AC068339.1-201ENST00000526965 141 ntBASIC0.89□□□□□ -2.27
COPAP53621 MIR5000-201ENST00000577717 103 ntBASIC0.89□□□□□ -2.27
COPAP53621 AC090897.1-201ENST00000580909 226 ntBASIC0.89□□□□□ -2.27
COPAP53621 MIR376B-201ENST00000614515 100 ntBASIC0.89□□□□□ -2.27
COPAP53621 MIR6129-201ENST00000616087 109 ntBASIC0.89□□□□□ -2.27
COPAP53621 PVT1_3.1-201ENST00000620853 95 ntBASIC0.89□□□□□ -2.27
COPAP53621 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
COPAP53621 MIR101-2-201ENST00000362195 79 ntBASIC0.88□□□□□ -2.27
COPAP53621 RNU6-429P-201ENST00000384582 108 ntBASIC0.88□□□□□ -2.27
COPAP53621 MIR573-201ENST00000384964 99 ntBASIC0.88□□□□□ -2.27
COPAP53621 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COPAP53621 RNA5SP436-201ENST00000516020 115 ntBASIC0.88□□□□□ -2.27
COPAP53621 RNU6-1018P-201ENST00000516577 106 ntBASIC0.88□□□□□ -2.27
COPAP53621 Y_RNA.697-201ENST00000516776 113 ntBASIC0.88□□□□□ -2.27
COPAP53621 MIR4500-201ENST00000579472 76 ntBASIC0.88□□□□□ -2.27
COPAP53621 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
COPAP53621 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.88□□□□□ -2.27
COPAP53621 Y_RNA.360-201ENST00000365512 102 ntBASIC0.87□□□□□ -2.27
COPAP53621 MIR34C-201ENST00000384831 77 ntBASIC0.87□□□□□ -2.27
COPAP53621 MIR598-201ENST00000384868 97 ntBASIC0.87□□□□□ -2.27
COPAP53621 RNU6-679P-201ENST00000391003 106 ntBASIC0.87□□□□□ -2.27
COPAP53621 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
COPAP53621 RNU6-1313P-201ENST00000362622 102 ntBASIC0.86□□□□□ -2.27
COPAP53621 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
COPAP53621 AC004941.2-201ENST00000427009 228 ntBASIC0.86□□□□□ -2.27
COPAP53621 MIR5009-201ENST00000578736 100 ntBASIC0.86□□□□□ -2.27
COPAP53621 RNU6-1290P-201ENST00000362957 109 ntBASIC0.85□□□□□ -2.27
COPAP53621 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
COPAP53621 RNU6-1107P-201ENST00000364817 104 ntBASIC0.85□□□□□ -2.27
COPAP53621 U8.6-201ENST00000364939 135 ntBASIC0.85□□□□□ -2.27
COPAP53621 RNA5SP117-201ENST00000365294 118 ntBASIC0.85□□□□□ -2.27
COPAP53621 RNA5SP222-201ENST00000411039 105 ntBASIC0.85□□□□□ -2.27
COPAP53621 RNA5SP480-201ENST00000516840 109 ntBASIC0.85□□□□□ -2.27
COPAP53621 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
COPAP53621 Y_RNA.536-201ENST00000384621 113 ntBASIC0.84□□□□□ -2.27
COPAP53621 RNU6-535P-201ENST00000384722 107 ntBASIC0.84□□□□□ -2.27
COPAP53621 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
COPAP53621 AC002350.1-201ENST00000490759 375 ntBASIC0.84□□□□□ -2.27
COPAP53621 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
COPAP53621 MIR3612-201ENST00000579753 87 ntBASIC0.84□□□□□ -2.27
COPAP53621 Y_RNA.323-201ENST00000365157 109 ntBASIC0.83□□□□□ -2.28
COPAP53621 RNU6-110P-201ENST00000384508 104 ntBASIC0.83□□□□□ -2.28
COPAP53621 SNORD100-201ENST00000408573 76 ntBASIC0.83□□□□□ -2.28
COPAP53621 MTND5P40-201ENST00000559945 246 ntBASIC0.83□□□□□ -2.28
COPAP53621 MIR4694-201ENST00000578534 80 ntBASIC0.83□□□□□ -2.28
COPAP53621 MIR548H5-201ENST00000580314 60 ntBASIC0.83□□□□□ -2.28
COPAP53621 AC096720.1-201ENST00000604441 183 ntBASIC0.83□□□□□ -2.28
COPAP53621 RNU7-10P-201ENST00000607194 63 ntBASIC0.83□□□□□ -2.28
COPAP53621 Y_RNA.174-201ENST00000363781 105 ntBASIC0.82□□□□□ -2.28
COPAP53621 SNORD38.1-201ENST00000363863 68 ntBASIC0.82□□□□□ -2.28
COPAP53621 RNU6-1014P-201ENST00000383940 103 ntBASIC0.82□□□□□ -2.28
COPAP53621 RNU6-1201P-201ENST00000384227 107 ntBASIC0.82□□□□□ -2.28
COPAP53621 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.82□□□□□ -2.28
COPAP53621 AL606490.4-201ENST00000423117 127 ntBASIC0.82□□□□□ -2.28
COPAP53621 AL353813.1-201ENST00000440700 253 ntBASIC0.82□□□□□ -2.28
COPAP53621 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.82□□□□□ -2.28
COPAP53621 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
COPAP53621 AL442128.1-201ENST00000615151 90 ntBASIC0.82□□□□□ -2.28
COPAP53621 Y_RNA.56-201ENST00000362798 112 ntBASIC0.81□□□□□ -2.28
COPAP53621 SNORD114-26-201ENST00000363543 72 ntBASIC0.81□□□□□ -2.28
COPAP53621 RNU6-1325P-201ENST00000364905 105 ntBASIC0.81□□□□□ -2.28
COPAP53621 RNU4-45P-201ENST00000365469 141 ntBASIC0.81□□□□□ -2.28
COPAP53621 RNU6-291P-201ENST00000384720 107 ntBASIC0.81□□□□□ -2.28
COPAP53621 MIR7-2-201ENST00000384970 110 ntBASIC0.81□□□□□ -2.28
COPAP53621 BX276092.1-201ENST00000427368 251 ntBASIC0.81□□□□□ -2.28
COPAP53621 RNU6-469P-201ENST00000516253 101 ntBASIC0.81□□□□□ -2.28
COPAP53621 RNU6-589P-201ENST00000516485 107 ntBASIC0.81□□□□□ -2.28
COPAP53621 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.81□□□□□ -2.28
COPAP53621 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms