Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 Y_RNA.12-201ENST00000362393 112 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 RNU6-1260P-201ENST00000362944 107 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 RNU6-957P-201ENST00000363652 99 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 RNU6-649P-201ENST00000384463 107 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 Y_RNA.536-201ENST00000384621 113 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 RNU6-687P-201ENST00000516443 89 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 SNORA25.16-201ENST00000516741 121 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 AL161722.3-201ENST00000605789 2983 ntBASIC2.72□□□□□ -1.97
PRIM1P49642 MIRLET7F1-201ENST00000362202 87 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 RNU6-403P-201ENST00000363163 104 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 Y_RNA.226-201ENST00000364337 114 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 Y_RNA.340-201ENST00000365330 92 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 MIR583-201ENST00000384846 75 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PRIM1P49642 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PRIM1P49642 SNORA17.3-201ENST00000391159 129 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 SNORD23.1-201ENST00000408212 104 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 AC244636.1-201ENST00000421152 228 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 AC108667.1-201ENST00000428618 249 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 AC104435.1-201ENST00000483483 166 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 RNU6-1053P-201ENST00000515930 101 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 RNU6-765P-201ENST00000516916 99 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 SNORA77B-201ENST00000578179 125 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 MIR4484-201ENST00000582855 83 ntBASIC2.71□□□□□ -1.98
PRIM1P49642 Y_RNA.42-201ENST00000362660 108 ntBASIC2.7□□□□□ -1.98
PRIM1P49642 Y_RNA.532-201ENST00000384590 113 ntBASIC2.7□□□□□ -1.98
PRIM1P49642 MIR1185-1-201ENST00000408598 86 ntBASIC2.7□□□□□ -1.98
PRIM1P49642 Y_RNA.809-201ENST00000516058 95 ntBASIC2.7□□□□□ -1.98
PRIM1P49642 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.7□□□□□ -1.98
PRIM1P49642 MIR4713-201ENST00000582691 75 ntBASIC2.7□□□□□ -1.98
PRIM1P49642 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.7□□□□□ -1.98
PRIM1P49642 AL773524.1-201ENST00000614065 229 ntBASIC2.7□□□□□ -1.98
PRIM1P49642 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PRIM1P49642 SNORA48.3-201ENST00000391081 134 ntBASIC2.69□□□□□ -1.98
PRIM1P49642 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.69□□□□□ -1.98
PRIM1P49642 MIR1257-201ENST00000408490 117 ntBASIC2.69□□□□□ -1.98
PRIM1P49642 ZNF355P-201ENST00000427301 3216 ntBASIC2.68□□□□□ -1.98
PRIM1P49642 Y_RNA.596-201ENST00000410462 109 ntBASIC2.68□□□□□ -1.98
PRIM1P49642 SNORA44.1-201ENST00000517031 108 ntBASIC2.68□□□□□ -1.98
PRIM1P49642 MIR7111-201ENST00000619751 72 ntBASIC2.68□□□□□ -1.98
PRIM1P49642 AP000553.5-201ENST00000641933 54 ntBASIC2.68□□□□□ -1.98
PRIM1P49642 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRIM1P49642 Y_RNA.36-201ENST00000362602 112 ntBASIC2.67□□□□□ -1.98
PRIM1P49642 RNU6-1051P-201ENST00000365471 102 ntBASIC2.67□□□□□ -1.98
PRIM1P49642 SNORA8.1-201ENST00000384250 140 ntBASIC2.67□□□□□ -1.98
PRIM1P49642 MIR942-201ENST00000401111 86 ntBASIC2.67□□□□□ -1.98
PRIM1P49642 MIR4781-201ENST00000585250 76 ntBASIC2.67□□□□□ -1.98
PRIM1P49642 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRIM1P49642 SNORA6-201ENST00000384033 151 ntBASIC2.66□□□□□ -1.98
PRIM1P49642 RNU6-1065P-201ENST00000384513 106 ntBASIC2.66□□□□□ -1.98
PRIM1P49642 AC097635.1-201ENST00000450678 155 ntBASIC2.66□□□□□ -1.98
PRIM1P49642 RNA5SP182-201ENST00000516064 82 ntBASIC2.66□□□□□ -1.98
PRIM1P49642 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
PRIM1P49642 TRDV1-202ENST00000621643 102 ntBASIC2.66□□□□□ -1.98
PRIM1P49642 MIRLET7G-201ENST00000362280 84 ntBASIC2.65□□□□□ -1.99
PRIM1P49642 MIR154-201ENST00000385243 84 ntBASIC2.65□□□□□ -1.99
PRIM1P49642 RNU7-195P-201ENST00000458793 62 ntBASIC2.65□□□□□ -1.99
PRIM1P49642 RNU7-185P-201ENST00000459215 60 ntBASIC2.65□□□□□ -1.99
PRIM1P49642 TRAJ51-201ENST00000504127 63 ntBASIC2.65□□□□□ -1.99
PRIM1P49642 MIR6082-201ENST00000613604 109 ntBASIC2.65□□□□□ -1.99
PRIM1P49642 RNU6-439P-201ENST00000384188 106 ntBASIC2.64□□□□□ -1.99
PRIM1P49642 MIR3664-201ENST00000579074 99 ntBASIC2.64□□□□□ -1.99
PRIM1P49642 AC023934.1-201ENST00000574529 2389 ntBASIC2.64□□□□□ -1.99
PRIM1P49642 RNU6-664P-201ENST00000362381 107 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 RNA5SP276-201ENST00000362580 94 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 SNORD101-201ENST00000384027 73 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 SNORD30.1-201ENST00000391309 70 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 snoU13.25-201ENST00000458945 104 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 AC138907.6-201ENST00000568401 126 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 AC138869.1-201ENST00000568623 124 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.63□□□□□ -1.99
PRIM1P49642 uc_338.6-201ENST00000613544 171 ntBASIC2.63□□□□□ -1.99
PRIM1P49642 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PRIM1P49642 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PRIM1P49642 MIR1287-201ENST00000408492 90 ntBASIC2.62□□□□□ -1.99
PRIM1P49642 AC092628.1-201ENST00000436250 252 ntBASIC2.62□□□□□ -1.99
PRIM1P49642 snoU13.9-201ENST00000458927 103 ntBASIC2.62□□□□□ -1.99
PRIM1P49642 AC013244.2-201ENST00000603396 103 ntBASIC2.62□□□□□ -1.99
PRIM1P49642 Y_RNA.207-201ENST00000364142 106 ntBASIC2.61□□□□□ -1.99
PRIM1P49642 AC079804.2-201ENST00000490376 200 ntBASIC2.61□□□□□ -1.99
PRIM1P49642 RNU6-340P-201ENST00000364005 107 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 RNU6-654P-201ENST00000364373 107 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 RNU6-1241P-201ENST00000384536 107 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 MIR144-201ENST00000384886 86 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 RNA5SP338-201ENST00000410495 85 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 Y_RNA.606-201ENST00000410579 103 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 MTRNR2L2-201ENST00000604882 87 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 MIR6840-201ENST00000611937 71 ntBASIC2.6□□□□□ -1.99
PRIM1P49642 MIR4287-201ENST00000579398 78 ntBASIC2.59□□□□□ -1.99
PRIM1P49642 snoU13.31-201ENST00000607291 104 ntBASIC2.59□□□□□ -1.99
PRIM1P49642 MIR8063-201ENST00000621930 81 ntBASIC2.59□□□□□ -1.99
PRIM1P49642 U6.111-201ENST00000636093 83 ntBASIC2.59□□□□□ -1.99
PRIM1P49642 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PRIM1P49642 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.58□□□□□ -2
PRIM1P49642 AC003989.2-201ENST00000440224 169 ntBASIC2.58□□□□□ -2
PRIM1P49642 AC079140.2-201ENST00000506193 142 ntBASIC2.58□□□□□ -2
PRIM1P49642 AC097510.1-201ENST00000510945 133 ntBASIC2.58□□□□□ -2
PRIM1P49642 MIR5089-201ENST00000580047 84 ntBASIC2.58□□□□□ -2
PRIM1P49642 MIR4696-201ENST00000581431 70 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms