Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU7-40P-201ENST00000516397 64 ntBASIC1.6□□□□□ -2.15
CCNFP41002 RNU6-850P-201ENST00000516934 103 ntBASIC1.6□□□□□ -2.15
CCNFP41002 Y_RNA.13-201ENST00000362403 112 ntBASIC1.59□□□□□ -2.15
CCNFP41002 Y_RNA.508-201ENST00000384502 114 ntBASIC1.59□□□□□ -2.15
CCNFP41002 MIR499A-201ENST00000384903 122 ntBASIC1.59□□□□□ -2.15
CCNFP41002 SNORA26.2-201ENST00000390922 122 ntBASIC1.59□□□□□ -2.15
CCNFP41002 RNU6-321P-201ENST00000410912 106 ntBASIC1.59□□□□□ -2.15
CCNFP41002 AC020891.4-201ENST00000605745 93 ntBASIC1.59□□□□□ -2.15
CCNFP41002 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCNFP41002 MIR494-201ENST00000349529 81 ntBASIC1.58□□□□□ -2.16
CCNFP41002 MIR101-2-201ENST00000362195 79 ntBASIC1.58□□□□□ -2.16
CCNFP41002 Y_RNA.17-201ENST00000362433 111 ntBASIC1.58□□□□□ -2.16
CCNFP41002 SNORD12-201ENST00000391002 90 ntBASIC1.58□□□□□ -2.16
CCNFP41002 AC013244.2-201ENST00000603396 103 ntBASIC1.58□□□□□ -2.16
CCNFP41002 AC025521.1-201ENST00000621624 286 ntBASIC1.58□□□□□ -2.16
CCNFP41002 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
CCNFP41002 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCNFP41002 RPS26P5-201ENST00000418544 335 ntBASIC1.57□□□□□ -2.16
CCNFP41002 AL513043.2-201ENST00000573941 143 ntBASIC1.57□□□□□ -2.16
CCNFP41002 AL359821.1-201ENST00000605519 182 ntBASIC1.57□□□□□ -2.16
CCNFP41002 MIR8066-201ENST00000617280 78 ntBASIC1.57□□□□□ -2.16
CCNFP41002 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
CCNFP41002 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
CCNFP41002 RNU6-364P-201ENST00000384387 107 ntBASIC1.56□□□□□ -2.16
CCNFP41002 MIR125B2-201ENST00000385128 89 ntBASIC1.56□□□□□ -2.16
CCNFP41002 MIR100-201ENST00000385259 80 ntBASIC1.56□□□□□ -2.16
CCNFP41002 Y_RNA.609-201ENST00000410669 89 ntBASIC1.56□□□□□ -2.16
CCNFP41002 SNRPGP12-201ENST00000449481 213 ntBASIC1.56□□□□□ -2.16
CCNFP41002 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.56□□□□□ -2.16
CCNFP41002 RNU7-156P-201ENST00000517214 74 ntBASIC1.56□□□□□ -2.16
CCNFP41002 MIR4676-201ENST00000583078 72 ntBASIC1.56□□□□□ -2.16
CCNFP41002 IGLL4P-201ENST00000614590 133 ntBASIC1.56□□□□□ -2.16
CCNFP41002 SNORA25.9-201ENST00000365087 128 ntBASIC1.55□□□□□ -2.16
CCNFP41002 RNU6-571P-201ENST00000384128 107 ntBASIC1.55□□□□□ -2.16
CCNFP41002 SNORA25-201ENST00000384384 134 ntBASIC1.55□□□□□ -2.16
CCNFP41002 SNORD116-22-201ENST00000384430 92 ntBASIC1.55□□□□□ -2.16
CCNFP41002 RNY1P4-201ENST00000384595 115 ntBASIC1.55□□□□□ -2.16
CCNFP41002 MIR450A2-201ENST00000385022 100 ntBASIC1.55□□□□□ -2.16
CCNFP41002 RNY4P29-201ENST00000410801 97 ntBASIC1.55□□□□□ -2.16
CCNFP41002 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
CCNFP41002 RNU6-1194P-201ENST00000516208 104 ntBASIC1.55□□□□□ -2.16
CCNFP41002 MIR6082-201ENST00000613604 109 ntBASIC1.55□□□□□ -2.16
CCNFP41002 MIR518E-201ENST00000385252 88 ntBASIC1.54□□□□□ -2.16
CCNFP41002 MIR1302-4-201ENST00000408701 150 ntBASIC1.54□□□□□ -2.16
CCNFP41002 Y_RNA.593-201ENST00000410292 98 ntBASIC1.54□□□□□ -2.16
CCNFP41002 RNU6-402P-201ENST00000410678 103 ntBASIC1.54□□□□□ -2.16
CCNFP41002 AC067940.1-201ENST00000458411 300 ntBASIC1.54□□□□□ -2.16
CCNFP41002 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
CCNFP41002 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
CCNFP41002 RNU6-977P-201ENST00000516411 103 ntBASIC1.54□□□□□ -2.16
CCNFP41002 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
CCNFP41002 AC062037.1-201ENST00000605302 128 ntBASIC1.54□□□□□ -2.16
CCNFP41002 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
CCNFP41002 MIR8070-201ENST00000616510 88 ntBASIC1.54□□□□□ -2.16
CCNFP41002 MIR1-1-201ENST00000362147 71 ntBASIC1.53□□□□□ -2.16
CCNFP41002 Y_RNA.118-201ENST00000363300 101 ntBASIC1.53□□□□□ -2.16
CCNFP41002 RNY1P1-201ENST00000364372 112 ntBASIC1.53□□□□□ -2.16
CCNFP41002 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
CCNFP41002 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
CCNFP41002 Y_RNA.388-201ENST00000383919 113 ntBASIC1.52□□□□□ -2.17
CCNFP41002 MIR516A2-201ENST00000384888 90 ntBASIC1.52□□□□□ -2.17
CCNFP41002 MIR516A1-201ENST00000385033 90 ntBASIC1.52□□□□□ -2.17
CCNFP41002 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
CCNFP41002 Y_RNA.697-201ENST00000516776 113 ntBASIC1.52□□□□□ -2.17
CCNFP41002 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
CCNFP41002 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CCNFP41002 MIR938-201ENST00000401216 83 ntBASIC1.51□□□□□ -2.17
CCNFP41002 SNORD100-201ENST00000408573 76 ntBASIC1.51□□□□□ -2.17
CCNFP41002 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.51□□□□□ -2.17
CCNFP41002 AC002429.1-201ENST00000437672 148 ntBASIC1.51□□□□□ -2.17
CCNFP41002 RNU6-267P-201ENST00000516714 103 ntBASIC1.51□□□□□ -2.17
CCNFP41002 MIR4668-201ENST00000582284 70 ntBASIC1.51□□□□□ -2.17
CCNFP41002 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.51□□□□□ -2.17
CCNFP41002 AC027335.2-201ENST00000624030 375 ntBASIC1.51□□□□□ -2.17
CCNFP41002 Y_RNA.355-201ENST00000365462 98 ntBASIC1.5□□□□□ -2.17
CCNFP41002 MIR635-201ENST00000384830 98 ntBASIC1.5□□□□□ -2.17
CCNFP41002 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
CCNFP41002 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
CCNFP41002 AP1B1P2-201ENST00000416196 106 ntBASIC1.5□□□□□ -2.17
CCNFP41002 RN7SKP12-201ENST00000516275 143 ntBASIC1.5□□□□□ -2.17
CCNFP41002 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
CCNFP41002 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
CCNFP41002 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CCNFP41002 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CCNFP41002 MIR520F-201ENST00000384824 87 ntBASIC1.49□□□□□ -2.17
CCNFP41002 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
CCNFP41002 RNU6-243P-201ENST00000391140 107 ntBASIC1.49□□□□□ -2.17
CCNFP41002 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
CCNFP41002 RNU6-519P-201ENST00000410590 108 ntBASIC1.49□□□□□ -2.17
CCNFP41002 SNORD63B-201ENST00000411005 70 ntBASIC1.49□□□□□ -2.17
CCNFP41002 RNU7-102P-201ENST00000458948 62 ntBASIC1.49□□□□□ -2.17
CCNFP41002 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.49□□□□□ -2.17
CCNFP41002 AL512598.1-201ENST00000610158 273 ntBASIC1.49□□□□□ -2.17
CCNFP41002 Y_RNA.73-201ENST00000362910 113 ntBASIC1.48□□□□□ -2.17
CCNFP41002 RNU6-820P-201ENST00000384273 107 ntBASIC1.48□□□□□ -2.17
CCNFP41002 Y_RNA.536-201ENST00000384621 113 ntBASIC1.48□□□□□ -2.17
CCNFP41002 RNU1-119P-201ENST00000391122 165 ntBASIC1.48□□□□□ -2.17
CCNFP41002 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
CCNFP41002 MIR548H5-201ENST00000580314 60 ntBASIC1.48□□□□□ -2.17
CCNFP41002 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms