Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PSMC1P5-201ENST00000512850 177 ntBASIC1.16□□□□□ -2.22
VAMP1P23763 SNORA25.15-201ENST00000516487 89 ntBASIC1.16□□□□□ -2.22
VAMP1P23763 SNORD53B-201ENST00000577887 78 ntBASIC1.16□□□□□ -2.22
VAMP1P23763 RNU6-170P-201ENST00000362832 104 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 RNU6-1229P-201ENST00000364295 107 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 U8.13-201ENST00000390842 128 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 SNORA67.6-201ENST00000391093 99 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 RNU6-135P-201ENST00000516769 101 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 RNU6-850P-201ENST00000516934 103 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 SNORA31.24-201ENST00000517232 57 ntBASIC1.15□□□□□ -2.23
VAMP1P23763 RNU6-554P-201ENST00000410466 106 ntBASIC1.14□□□□□ -2.23
VAMP1P23763 Y_RNA.601-201ENST00000410500 113 ntBASIC1.14□□□□□ -2.23
VAMP1P23763 Y_RNA.140-201ENST00000363474 103 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 Y_RNA.247-201ENST00000364500 92 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 RNU6-106P-201ENST00000384405 107 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 Y_RNA.567-201ENST00000384736 106 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 BTF3P4-201ENST00000418852 495 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 SNRPGP12-201ENST00000449481 213 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 SNORA31.14-201ENST00000516728 116 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 RNU6-1006P-201ENST00000516998 103 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 MIR4255-201ENST00000579351 72 ntBASIC1.13□□□□□ -2.23
VAMP1P23763 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
VAMP1P23763 Y_RNA.32-201ENST00000362589 110 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 SNORA63.4-201ENST00000362763 126 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 Y_RNA.57-201ENST00000362806 113 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 Y_RNA.78-201ENST00000362970 110 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 RNU6-1125P-201ENST00000363601 107 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 Y_RNA.342-201ENST00000365352 113 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 RNU6-480P-201ENST00000384332 107 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 MIR1289-2-201ENST00000408360 111 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 AC092628.1-201ENST00000436250 252 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 Y_RNA.676-201ENST00000516393 96 ntBASIC1.12□□□□□ -2.23
VAMP1P23763 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
VAMP1P23763 SCARNA23-201ENST00000516060 130 ntBASIC1.11□□□□□ -2.23
VAMP1P23763 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.11□□□□□ -2.23
VAMP1P23763 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
VAMP1P23763 MIR18A-201ENST00000362310 71 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 RNY1P10-201ENST00000363268 113 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 RNU6-44P-201ENST00000384045 107 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 RNU6-110P-201ENST00000384508 104 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 MIR644A-201ENST00000385262 94 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 SNORD63B-201ENST00000411005 70 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.1□□□□□ -2.23
VAMP1P23763 AC068338.1-201ENST00000565567 176 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 MIR6845-201ENST00000613182 61 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 uc_338.16-201ENST00000621804 95 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
VAMP1P23763 RNU6-766P-201ENST00000362478 107 ntBASIC1.09□□□□□ -2.23
VAMP1P23763 Y_RNA.96-201ENST00000363092 109 ntBASIC1.09□□□□□ -2.23
VAMP1P23763 MIR3678-201ENST00000578455 94 ntBASIC1.09□□□□□ -2.23
VAMP1P23763 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.09□□□□□ -2.23
VAMP1P23763 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
VAMP1P23763 MIR450A1-201ENST00000362262 91 ntBASIC1.08□□□□□ -2.24
VAMP1P23763 Y_RNA.338-201ENST00000365320 114 ntBASIC1.08□□□□□ -2.24
VAMP1P23763 AC109327.2-201ENST00000448339 378 ntBASIC1.08□□□□□ -2.24
VAMP1P23763 RNU6-1053P-201ENST00000515930 101 ntBASIC1.08□□□□□ -2.24
VAMP1P23763 MIR4439-201ENST00000583746 80 ntBASIC1.08□□□□□ -2.24
VAMP1P23763 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.08□□□□□ -2.24
VAMP1P23763 RNU6-243P-201ENST00000391140 107 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 SNORA19.1-201ENST00000410656 129 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 TRAJ51-201ENST00000504127 63 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 Y_RNA.809-201ENST00000516058 95 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 RNU6-904P-201ENST00000516206 101 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.07□□□□□ -2.24
VAMP1P23763 MIR4498-201ENST00000577599 66 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 RNU6-86P-201ENST00000606534 107 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 AL512598.1-201ENST00000610158 273 ntBASIC1.07□□□□□ -2.24
VAMP1P23763 Y_RNA.95-201ENST00000363079 95 ntBASIC1.06□□□□□ -2.24
VAMP1P23763 RNU6-60P-201ENST00000364792 103 ntBASIC1.06□□□□□ -2.24
VAMP1P23763 Y_RNA.544-201ENST00000384650 113 ntBASIC1.06□□□□□ -2.24
VAMP1P23763 MIR590-201ENST00000385008 97 ntBASIC1.06□□□□□ -2.24
VAMP1P23763 MIR599-201ENST00000385069 95 ntBASIC1.06□□□□□ -2.24
VAMP1P23763 AL603825.1-201ENST00000438481 80 ntBASIC1.06□□□□□ -2.24
VAMP1P23763 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
VAMP1P23763 RNU1-92P-201ENST00000517017 135 ntBASIC1.06□□□□□ -2.24
VAMP1P23763 MIR378A-201ENST00000362177 66 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 Y_RNA.173-201ENST00000363776 113 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 RNU6-1254P-201ENST00000391266 104 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 AC097635.1-201ENST00000450678 155 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 RNU1-123P-201ENST00000458950 160 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 RNU6-795P-201ENST00000516323 103 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 snoU13.31-201ENST00000607291 104 ntBASIC1.05□□□□□ -2.24
VAMP1P23763 Y_RNA.107-201ENST00000363190 121 ntBASIC1.04□□□□□ -2.24
VAMP1P23763 RNA5SP245-201ENST00000364239 121 ntBASIC1.04□□□□□ -2.24
VAMP1P23763 MIR516A2-201ENST00000384888 90 ntBASIC1.04□□□□□ -2.24
VAMP1P23763 MIR516A1-201ENST00000385033 90 ntBASIC1.04□□□□□ -2.24
VAMP1P23763 MIR548L-201ENST00000408303 86 ntBASIC1.04□□□□□ -2.24
VAMP1P23763 RNU7-195P-201ENST00000458793 62 ntBASIC1.04□□□□□ -2.24
VAMP1P23763 Y_RNA.818-201ENST00000618813 71 ntBASIC1.04□□□□□ -2.24
VAMP1P23763 RNU1-17P-201ENST00000363022 152 ntBASIC1.03□□□□□ -2.24
VAMP1P23763 SNORD115-24-201ENST00000363528 82 ntBASIC1.03□□□□□ -2.24
VAMP1P23763 RNU6-755P-201ENST00000364400 103 ntBASIC1.03□□□□□ -2.24
VAMP1P23763 RNA5SP190-201ENST00000365222 118 ntBASIC1.03□□□□□ -2.24
VAMP1P23763 MIR140-201ENST00000385282 100 ntBASIC1.03□□□□□ -2.24
VAMP1P23763 RNA5SP99-201ENST00000364020 114 ntBASIC1.02□□□□□ -2.25
VAMP1P23763 RNU6-1163P-201ENST00000364516 107 ntBASIC1.02□□□□□ -2.25
VAMP1P23763 MIR764-201ENST00000390811 85 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms