Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 RNU6-476P-201ENST00000384726 107 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 MIR1302-11-201ENST00000408051 138 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 MIR1302-9-201ENST00000408365 138 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 MIR1302-10-201ENST00000408734 138 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 RNU7-2P-201ENST00000516096 62 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 RNA5SP236-201ENST00000516169 116 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 RNU6-850P-201ENST00000516934 103 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 RNU2-4P-201ENST00000606190 192 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 MIR1302-2-201ENST00000607096 138 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 MIR6854-201ENST00000614935 69 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 AC087741.2-201ENST00000619415 172 ntBASIC-1.3□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.31□□□□□ -2.62
TRAV3A0A0B4J244 MIR517B-201ENST00000385102 67 ntBASIC-1.31□□□□□ -2.62
TRAV3A0A0B4J244 RNU6-381P-201ENST00000391259 108 ntBASIC-1.31□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.31□□□□□ -2.62
TRAV3A0A0B4J244 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.31□□□□□ -2.62
TRAV3A0A0B4J244 MIR376B-201ENST00000614515 100 ntBASIC-1.31□□□□□ -2.62
TRAV3A0A0B4J244 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.31□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 MIR516A2-201ENST00000384888 90 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 MIR516A1-201ENST00000385033 90 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 MIR216B-201ENST00000390186 82 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 AP000533.3-201ENST00000447704 118 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 RNU6-274P-201ENST00000459566 107 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 MIR4499-201ENST00000584834 69 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 MIR4723-201ENST00000585070 81 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 MIR548O2-201ENST00000616090 70 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 AP000770.2-201ENST00000623694 100 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 MTND4LP32-201ENST00000636111 270 ntBASIC-1.32□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 RNU6-431P-201ENST00000383874 107 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 RNU6-121P-201ENST00000410525 99 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 SNORD2.1-201ENST00000458762 69 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 SCARNA18B-201ENST00000458806 135 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 MIR5704-201ENST00000584029 77 ntBASIC-1.33□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 MIR548F1-201ENST00000408667 84 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 AC084782.3-201ENST00000612282 578 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 AC084781.2-201ENST00000615568 161 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 uc_338.19-201ENST00000616808 99 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 U4.2-201ENST00000618561 85 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 TRDV1-202ENST00000621643 102 ntBASIC-1.34□□□□□ -2.62
TRAV3A0A0B4J244 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 SNORD116-6-201ENST00000384711 96 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 RNU6-976P-201ENST00000516086 111 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 AC090574.1-201ENST00000623186 233 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 U6.100-201ENST00000636230 99 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.35□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.36□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.36□□□□□ -2.63
TRAV3A0A0B4J244 SNORD64-201ENST00000386683 67 ntBASIC-1.36□□□□□ -2.63
TRAV3A0A0B4J244 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.36□□□□□ -2.63
TRAV3A0A0B4J244 MIR548E-201ENST00000408287 88 ntBASIC-1.36□□□□□ -2.63
TRAV3A0A0B4J244 AC009779.6-201ENST00000603972 165 ntBASIC-1.36□□□□□ -2.63
TRAV3A0A0B4J244 MIR8068-201ENST00000618032 68 ntBASIC-1.36□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 RNU6-690P-201ENST00000365242 106 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 SNORD77B-201ENST00000391112 67 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 MIR1285-2-201ENST00000408311 88 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 RNU6-592P-201ENST00000411333 103 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 AL353813.1-201ENST00000440700 253 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 SERF1AP1-201ENST00000514575 187 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 RNU6-718P-201ENST00000516166 105 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 RNU6-277P-201ENST00000516272 106 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 AC140658.3-201ENST00000567603 271 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 MIR382-201ENST00000637119 76 ntBASIC-1.37□□□□□ -2.63
TRAV3A0A0B4J244 MIR365A-201ENST00000362260 87 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 SNORD36A-201ENST00000362874 73 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 RNU6-103P-201ENST00000363686 107 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 MIR582-201ENST00000365731 98 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms