Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC141846.1-201ENST00000568348 142 ntBASIC1.65□□□□□ -2.15
MRE11P49959 AL442128.1-201ENST00000615151 90 ntBASIC1.65□□□□□ -2.15
MRE11P49959 AL662814.1-201ENST00000617364 121 ntBASIC1.65□□□□□ -2.15
MRE11P49959 AL161722.3-201ENST00000605789 2983 ntBASIC1.64□□□□□ -2.15
MRE11P49959 Y_RNA.115-201ENST00000363272 98 ntBASIC1.64□□□□□ -2.15
MRE11P49959 SNORD114-10-201ENST00000363409 72 ntBASIC1.64□□□□□ -2.15
MRE11P49959 RNY1P13-201ENST00000365030 105 ntBASIC1.64□□□□□ -2.15
MRE11P49959 RNU6-49P-201ENST00000384256 107 ntBASIC1.64□□□□□ -2.15
MRE11P49959 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.64□□□□□ -2.15
MRE11P49959 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.64□□□□□ -2.15
MRE11P49959 AC027119.1-201ENST00000440877 241 ntBASIC1.64□□□□□ -2.15
MRE11P49959 UBL5P1-201ENST00000507979 193 ntBASIC1.64□□□□□ -2.15
MRE11P49959 RNU6-795P-201ENST00000516323 103 ntBASIC1.64□□□□□ -2.15
MRE11P49959 AC012531.4-201ENST00000616509 177 ntBASIC1.64□□□□□ -2.15
MRE11P49959 RNU6-170P-201ENST00000362832 104 ntBASIC1.63□□□□□ -2.15
MRE11P49959 RNA5SP62-201ENST00000363457 110 ntBASIC1.63□□□□□ -2.15
MRE11P49959 SNORD114-27-201ENST00000363766 70 ntBASIC1.63□□□□□ -2.15
MRE11P49959 Y_RNA.448-201ENST00000384185 108 ntBASIC1.63□□□□□ -2.15
MRE11P49959 RNU6-1321P-201ENST00000390905 107 ntBASIC1.63□□□□□ -2.15
MRE11P49959 MIR1185-1-201ENST00000408598 86 ntBASIC1.63□□□□□ -2.15
MRE11P49959 AC096949.1-201ENST00000412047 152 ntBASIC1.63□□□□□ -2.15
MRE11P49959 RNU6-902P-201ENST00000517212 91 ntBASIC1.63□□□□□ -2.15
MRE11P49959 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
MRE11P49959 AC091304.10-201ENST00000641554 121 ntBASIC1.63□□□□□ -2.15
MRE11P49959 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MRE11P49959 SNORD45B-201ENST00000364617 72 ntBASIC1.62□□□□□ -2.15
MRE11P49959 Y_RNA.342-201ENST00000365352 113 ntBASIC1.62□□□□□ -2.15
MRE11P49959 RNU6-1065P-201ENST00000384513 106 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR34C-201ENST00000384831 77 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR588-201ENST00000384900 83 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR193B-201ENST00000384907 83 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR758-201ENST00000390227 88 ntBASIC1.62□□□□□ -2.15
MRE11P49959 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.62□□□□□ -2.15
MRE11P49959 AC004941.2-201ENST00000427009 228 ntBASIC1.62□□□□□ -2.15
MRE11P49959 RPL30P7-201ENST00000479312 323 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR2115-201ENST00000516657 100 ntBASIC1.62□□□□□ -2.15
MRE11P49959 RNU6-1006P-201ENST00000516998 103 ntBASIC1.62□□□□□ -2.15
MRE11P49959 RNU6-165P-201ENST00000517170 99 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR1273G-201ENST00000577677 100 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR3664-201ENST00000579074 99 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR4264-201ENST00000583520 66 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR548Z-201ENST00000584743 97 ntBASIC1.62□□□□□ -2.15
MRE11P49959 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.62□□□□□ -2.15
MRE11P49959 AC105081.1-201ENST00000617727 106 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MALAT1.1-201ENST00000618249 95 ntBASIC1.62□□□□□ -2.15
MRE11P49959 MIR6740-201ENST00000618268 113 ntBASIC1.62□□□□□ -2.15
MRE11P49959 RNA5SP264-201ENST00000363115 107 ntBASIC1.61□□□□□ -2.15
MRE11P49959 Y_RNA.247-201ENST00000364500 92 ntBASIC1.61□□□□□ -2.15
MRE11P49959 MIR563-201ENST00000385080 79 ntBASIC1.61□□□□□ -2.15
MRE11P49959 Y_RNA.659-201ENST00000515994 113 ntBASIC1.61□□□□□ -2.15
MRE11P49959 AC036111.3-201ENST00000526389 112 ntBASIC1.61□□□□□ -2.15
MRE11P49959 AC068338.1-201ENST00000565567 176 ntBASIC1.61□□□□□ -2.15
MRE11P49959 MIR4777-201ENST00000583710 86 ntBASIC1.61□□□□□ -2.15
MRE11P49959 AP000753.3-201ENST00000604083 169 ntBASIC1.61□□□□□ -2.15
MRE11P49959 MIR376B-201ENST00000614515 100 ntBASIC1.61□□□□□ -2.15
MRE11P49959 MIR6516-201ENST00000630554 81 ntBASIC1.61□□□□□ -2.15
MRE11P49959 MIR103A2-201ENST00000362154 78 ntBASIC1.6□□□□□ -2.15
MRE11P49959 Y_RNA.95-201ENST00000363079 95 ntBASIC1.6□□□□□ -2.15
MRE11P49959 Y_RNA.220-201ENST00000364244 109 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-865P-201ENST00000364772 107 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-294P-201ENST00000364999 102 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-949P-201ENST00000384040 107 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNY1P7-201ENST00000384743 110 ntBASIC1.6□□□□□ -2.15
MRE11P49959 MT-TN-201ENST00000387400 73 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-205P-201ENST00000390858 107 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-447P-201ENST00000410293 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-1118P-201ENST00000410382 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-1076P-201ENST00000410397 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-355P-201ENST00000410427 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-791P-201ENST00000410467 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-705P-201ENST00000410601 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-1100P-201ENST00000410691 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-860P-201ENST00000410860 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-1217P-201ENST00000411276 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU6-785P-201ENST00000411324 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU7-61P-201ENST00000515897 61 ntBASIC1.6□□□□□ -2.15
MRE11P49959 RNU11-2P-201ENST00000516898 142 ntBASIC1.6□□□□□ -2.15
MRE11P49959 U6.90-201ENST00000614007 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 AL627230.5-201ENST00000619807 58 ntBASIC1.6□□□□□ -2.15
MRE11P49959 U6.70-201ENST00000620287 104 ntBASIC1.6□□□□□ -2.15
MRE11P49959 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
MRE11P49959 MIR150-201ENST00000385048 84 ntBASIC1.59□□□□□ -2.15
MRE11P49959 RNU6-644P-201ENST00000391155 98 ntBASIC1.59□□□□□ -2.15
MRE11P49959 RNU7-48P-201ENST00000458875 63 ntBASIC1.59□□□□□ -2.15
MRE11P49959 AL512310.8-201ENST00000550183 120 ntBASIC1.59□□□□□ -2.15
MRE11P49959 SNORD38.1-201ENST00000363863 68 ntBASIC1.58□□□□□ -2.16
MRE11P49959 RNU6-654P-201ENST00000364373 107 ntBASIC1.58□□□□□ -2.16
MRE11P49959 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
MRE11P49959 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.58□□□□□ -2.16
MRE11P49959 RNU6-613P-201ENST00000410412 108 ntBASIC1.58□□□□□ -2.16
MRE11P49959 AC098934.3-201ENST00000430450 190 ntBASIC1.58□□□□□ -2.16
MRE11P49959 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.58□□□□□ -2.16
MRE11P49959 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MRE11P49959 MIR377-201ENST00000362145 69 ntBASIC1.57□□□□□ -2.16
MRE11P49959 MIR30D-201ENST00000362283 70 ntBASIC1.57□□□□□ -2.16
MRE11P49959 RNA5SP257-201ENST00000363023 116 ntBASIC1.57□□□□□ -2.16
MRE11P49959 Y_RNA.98-201ENST00000363109 102 ntBASIC1.57□□□□□ -2.16
MRE11P49959 Y_RNA.290-201ENST00000364879 114 ntBASIC1.57□□□□□ -2.16
MRE11P49959 RNU6-35P-201ENST00000384530 107 ntBASIC1.57□□□□□ -2.16
MRE11P49959 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 287.6 ms