Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 SNORD49B-201ENST00000365172 72 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 RNU6-449P-201ENST00000383914 107 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 RNU6-713P-201ENST00000384761 107 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 RNA5SP236-201ENST00000516169 116 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 CR383656.4-201ENST00000546909 122 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 MIR4645-201ENST00000583158 77 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 RN7SL660P-201ENST00000614852 299 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 MIR6779-201ENST00000617283 64 ntBASIC-0.58□□□□□ -2.5
SSR1P43307 SNORD114-28-201ENST00000363610 72 ntBASIC-0.59□□□□□ -2.5
SSR1P43307 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.59□□□□□ -2.5
SSR1P43307 MIR206-201ENST00000384872 86 ntBASIC-0.59□□□□□ -2.5
SSR1P43307 RNU6-635P-201ENST00000516651 102 ntBASIC-0.59□□□□□ -2.5
SSR1P43307 RNA5SP257-201ENST00000363023 116 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 RNU6-508P-201ENST00000363231 103 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 SNORA25.7-201ENST00000364375 127 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 MIR3920-201ENST00000581751 86 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 AC009779.6-201ENST00000603972 165 ntBASIC-0.6□□□□□ -2.51
SSR1P43307 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.61□□□□□ -2.51
SSR1P43307 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.61□□□□□ -2.51
SSR1P43307 MIR876-201ENST00000401147 81 ntBASIC-0.61□□□□□ -2.51
SSR1P43307 MTATP6P23-201ENST00000440153 476 ntBASIC-0.61□□□□□ -2.51
SSR1P43307 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 U8.6-201ENST00000364939 135 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 MIR196A2-201ENST00000385189 110 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 AC244250.2-201ENST00000418731 148 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 AC097635.1-201ENST00000450678 155 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 SNORA25.13-201ENST00000516395 103 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 RNA5SP285-201ENST00000516619 119 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 MIR4308-201ENST00000580634 81 ntBASIC-0.62□□□□□ -2.51
SSR1P43307 MIR335-201ENST00000362173 94 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 RNU6-524P-201ENST00000384270 107 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 SNORD63B-201ENST00000411005 70 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 RNU7-48P-201ENST00000458875 63 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 RNU7-164P-201ENST00000459221 62 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 RNU7-123P-201ENST00000515911 60 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 AC021443.1-201ENST00000604478 211 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 MIR6507-201ENST00000613630 70 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 MIR6759-201ENST00000638110 65 ntBASIC-0.63□□□□□ -2.51
SSR1P43307 MIR148A-201ENST00000362215 68 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 RNU6-472P-201ENST00000384299 107 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 MIR1302-6-201ENST00000408466 90 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 AC109327.2-201ENST00000448339 378 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 RNU7-106P-201ENST00000459514 67 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 RNU7-10P-201ENST00000607194 63 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 MIR8064-201ENST00000612863 90 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
SSR1P43307 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.64□□□□□ -2.51
SSR1P43307 RNU6-509P-201ENST00000363519 107 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 SNORA33.2-201ENST00000365413 134 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 RNU6-768P-201ENST00000384683 107 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 RNU7-13P-201ENST00000516413 62 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 RNU7-188P-201ENST00000517063 64 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 MIR8062-201ENST00000621515 85 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 U6.106-201ENST00000636360 105 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 MIR4788-201ENST00000639104 80 ntBASIC-0.65□□□□□ -2.51
SSR1P43307 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.66□□□□□ -2.51
SSR1P43307 MIR655-201ENST00000362159 97 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 RNU4-69P-201ENST00000410677 143 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 RNU2-38P-201ENST00000410856 79 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.66□□□□□ -2.52
SSR1P43307 AC138907.4-201ENST00000570107 226 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 MIR548AG2-201ENST00000581228 64 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 uc_338.36-201ENST00000622331 158 ntBASIC-0.66□□□□□ -2.52
SSR1P43307 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.66□□□□□ -2.52
SSR1P43307 RNU1-141P-201ENST00000364623 158 ntBASIC-0.67□□□□□ -2.52
SSR1P43307 RNU6-284P-201ENST00000411105 106 ntBASIC-0.67□□□□□ -2.52
SSR1P43307 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.67□□□□□ -2.52
SSR1P43307 AL162726.3-218ENST00000636401 95 ntBASIC-0.67□□□□□ -2.52
SSR1P43307 SNORD114-11-201ENST00000363738 75 ntBASIC-0.68□□□□□ -2.52
SSR1P43307 RNA5SP205-201ENST00000364653 136 ntBASIC-0.68□□□□□ -2.52
SSR1P43307 RNU6-811P-201ENST00000384069 107 ntBASIC-0.68□□□□□ -2.52
SSR1P43307 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.68□□□□□ -2.52
SSR1P43307 MIR376B-201ENST00000614515 100 ntBASIC-0.68□□□□□ -2.52
SSR1P43307 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.69□□□□□ -2.52
SSR1P43307 RNY1P11-201ENST00000363759 113 ntBASIC-0.69□□□□□ -2.52
SSR1P43307 RNY4P28-201ENST00000365281 93 ntBASIC-0.69□□□□□ -2.52
SSR1P43307 RNU6-639P-201ENST00000384074 107 ntBASIC-0.69□□□□□ -2.52
SSR1P43307 RNU6-616P-201ENST00000384353 107 ntBASIC-0.69□□□□□ -2.52
SSR1P43307 SNORA32.3-201ENST00000384772 121 ntBASIC-0.69□□□□□ -2.52
SSR1P43307 MTND5P40-201ENST00000559945 246 ntBASIC-0.69□□□□□ -2.52
SSR1P43307 MIR548AE1-201ENST00000583292 70 ntBASIC-0.69□□□□□ -2.52
SSR1P43307 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.7□□□□□ -2.52
SSR1P43307 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.7□□□□□ -2.52
SSR1P43307 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms