Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 MIR4771-1-201ENST00000582617 74 ntBASIC2.13□□□□□ -2.07
SOX11P35716 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
SOX11P35716 MIR6873-201ENST00000622788 63 ntBASIC2.13□□□□□ -2.07
SOX11P35716 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SOX11P35716 MIR101-2-201ENST00000362195 79 ntBASIC2.12□□□□□ -2.07
SOX11P35716 SNORD78.1-201ENST00000390866 65 ntBASIC2.12□□□□□ -2.07
SOX11P35716 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SOX11P35716 RNU6-902P-201ENST00000517212 91 ntBASIC2.12□□□□□ -2.07
SOX11P35716 AC036111.3-201ENST00000526389 112 ntBASIC2.12□□□□□ -2.07
SOX11P35716 AC008163.1-202ENST00000636004 2889 ntBASIC2.12□□□□□ -2.07
SOX11P35716 RNU6-509P-201ENST00000363519 107 ntBASIC2.11□□□□□ -2.07
SOX11P35716 RNU6-1124P-201ENST00000384169 107 ntBASIC2.11□□□□□ -2.07
SOX11P35716 AL591704.2-201ENST00000421658 181 ntBASIC2.11□□□□□ -2.07
SOX11P35716 AL161932.1-201ENST00000437408 146 ntBASIC2.11□□□□□ -2.07
SOX11P35716 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SOX11P35716 RNA5SP432-201ENST00000362480 116 ntBASIC2.1□□□□□ -2.07
SOX11P35716 Y_RNA.426-201ENST00000384068 113 ntBASIC2.1□□□□□ -2.07
SOX11P35716 MIR504-201ENST00000385065 83 ntBASIC2.1□□□□□ -2.07
SOX11P35716 RNU6-910P-201ENST00000390844 107 ntBASIC2.1□□□□□ -2.07
SOX11P35716 MIR548BB-201ENST00000626714 66 ntBASIC2.1□□□□□ -2.07
SOX11P35716 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.1□□□□□ -2.07
SOX11P35716 RNU6-633P-201ENST00000362612 103 ntBASIC2.09□□□□□ -2.07
SOX11P35716 Y_RNA.363-201ENST00000365529 113 ntBASIC2.09□□□□□ -2.07
SOX11P35716 RNU6-979P-201ENST00000383896 107 ntBASIC2.09□□□□□ -2.07
SOX11P35716 MIR516A2-201ENST00000384888 90 ntBASIC2.09□□□□□ -2.07
SOX11P35716 MIR516A1-201ENST00000385033 90 ntBASIC2.09□□□□□ -2.07
SOX11P35716 RNU6-994P-201ENST00000410507 111 ntBASIC2.09□□□□□ -2.07
SOX11P35716 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.09□□□□□ -2.07
SOX11P35716 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
SOX11P35716 AC013244.2-201ENST00000603396 103 ntBASIC2.09□□□□□ -2.07
SOX11P35716 Y_RNA.13-201ENST00000362403 112 ntBASIC2.08□□□□□ -2.08
SOX11P35716 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
SOX11P35716 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
SOX11P35716 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
SOX11P35716 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.08□□□□□ -2.08
SOX11P35716 MIR3202-2-201ENST00000635980 79 ntBASIC2.08□□□□□ -2.08
SOX11P35716 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SOX11P35716 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SOX11P35716 RNU4-32P-201ENST00000363404 141 ntBASIC2.07□□□□□ -2.08
SOX11P35716 SNORD115-27-201ENST00000364430 82 ntBASIC2.07□□□□□ -2.08
SOX11P35716 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
SOX11P35716 Y_RNA.437-201ENST00000384113 113 ntBASIC2.07□□□□□ -2.08
SOX11P35716 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
SOX11P35716 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.07□□□□□ -2.08
SOX11P35716 MIR7843-201ENST00000622274 79 ntBASIC2.07□□□□□ -2.08
SOX11P35716 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
SOX11P35716 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SOX11P35716 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SOX11P35716 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SOX11P35716 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SOX11P35716 SNORD114-1-201ENST00000362705 72 ntBASIC2.06□□□□□ -2.08
SOX11P35716 RNU6-243P-201ENST00000391140 107 ntBASIC2.06□□□□□ -2.08
SOX11P35716 SNORD111-201ENST00000408139 94 ntBASIC2.06□□□□□ -2.08
SOX11P35716 RNU6-1194P-201ENST00000516208 104 ntBASIC2.06□□□□□ -2.08
SOX11P35716 AC106800.4-201ENST00000614905 153 ntBASIC2.06□□□□□ -2.08
SOX11P35716 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
SOX11P35716 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SOX11P35716 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
SOX11P35716 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SOX11P35716 RNU6-228P-201ENST00000362700 106 ntBASIC2.05□□□□□ -2.08
SOX11P35716 SNORA80D-201ENST00000384488 135 ntBASIC2.05□□□□□ -2.08
SOX11P35716 MIR519C-201ENST00000385053 87 ntBASIC2.05□□□□□ -2.08
SOX11P35716 RNU6-1254P-201ENST00000391266 104 ntBASIC2.05□□□□□ -2.08
SOX11P35716 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
SOX11P35716 RNU7-40P-201ENST00000516397 64 ntBASIC2.05□□□□□ -2.08
SOX11P35716 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.05□□□□□ -2.08
SOX11P35716 MIR6082-201ENST00000613604 109 ntBASIC2.05□□□□□ -2.08
SOX11P35716 RNU6-1275P-201ENST00000391087 107 ntBASIC2.04□□□□□ -2.08
SOX11P35716 SNORD100-201ENST00000408573 76 ntBASIC2.04□□□□□ -2.08
SOX11P35716 RNU7-21P-201ENST00000459430 62 ntBASIC2.04□□□□□ -2.08
SOX11P35716 RNU6-237P-201ENST00000515985 71 ntBASIC2.04□□□□□ -2.08
SOX11P35716 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
SOX11P35716 AL512598.1-201ENST00000610158 273 ntBASIC2.04□□□□□ -2.08
SOX11P35716 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
SOX11P35716 SNORD115-37-201ENST00000363768 82 ntBASIC2.03□□□□□ -2.08
SOX11P35716 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SOX11P35716 SNORA64-201ENST00000384674 134 ntBASIC2.03□□□□□ -2.08
SOX11P35716 MIR635-201ENST00000384830 98 ntBASIC2.03□□□□□ -2.08
SOX11P35716 MIR222-201ENST00000384992 110 ntBASIC2.03□□□□□ -2.08
SOX11P35716 MIR125B2-201ENST00000385128 89 ntBASIC2.03□□□□□ -2.08
SOX11P35716 MIR1255A-201ENST00000408338 113 ntBASIC2.03□□□□□ -2.08
SOX11P35716 SNORD63B-201ENST00000411005 70 ntBASIC2.03□□□□□ -2.08
SOX11P35716 RNU7-90P-201ENST00000459216 62 ntBASIC2.03□□□□□ -2.08
SOX11P35716 RNU7-156P-201ENST00000517214 74 ntBASIC2.03□□□□□ -2.08
SOX11P35716 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
SOX11P35716 AC006160.2-201ENST00000637708 154 ntBASIC2.03□□□□□ -2.08
SOX11P35716 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.02□□□□□ -2.09
SOX11P35716 RNU6-364P-201ENST00000384387 107 ntBASIC2.02□□□□□ -2.09
SOX11P35716 RNA5SP225-201ENST00000410874 135 ntBASIC2.02□□□□□ -2.09
SOX11P35716 RPS26P5-201ENST00000418544 335 ntBASIC2.02□□□□□ -2.09
SOX11P35716 snoU13.11-201ENST00000459219 104 ntBASIC2.02□□□□□ -2.09
SOX11P35716 Y_RNA.648-201ENST00000459455 110 ntBASIC2.02□□□□□ -2.09
SOX11P35716 RNU7-171P-201ENST00000459581 62 ntBASIC2.02□□□□□ -2.09
SOX11P35716 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX11P35716 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.01□□□□□ -2.09
SOX11P35716 Y_RNA.536-201ENST00000384621 113 ntBASIC2.01□□□□□ -2.09
SOX11P35716 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.01□□□□□ -2.09
SOX11P35716 MIR1289-2-201ENST00000408360 111 ntBASIC2.01□□□□□ -2.09
SOX11P35716 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.01□□□□□ -2.09
SOX11P35716 SNORD4B-201ENST00000459083 72 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms