Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC005908.1-201ENST00000468701 347 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 AC004223.1-201ENST00000479840 271 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 AC242498.1-201ENST00000604134 111 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 MIR8081-201ENST00000611533 95 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 RNY1P2-201ENST00000364820 117 ntBASIC2.54□□□□□ -2
CSB-PGBD3P0DP91 AC138749.4-201ENST00000563970 127 ntBASIC2.54□□□□□ -2
CSB-PGBD3P0DP91 MIR3935-201ENST00000583472 104 ntBASIC2.54□□□□□ -2
CSB-PGBD3P0DP91 U7.4-201ENST00000614961 63 ntBASIC2.54□□□□□ -2
CSB-PGBD3P0DP91 MIR8066-201ENST00000617280 78 ntBASIC2.54□□□□□ -2
CSB-PGBD3P0DP91 AC084768.2-201ENST00000622736 221 ntBASIC2.54□□□□□ -2
CSB-PGBD3P0DP91 WWP1P1-201ENST00000466609 2769 ntBASIC2.54□□□□□ -2
CSB-PGBD3P0DP91 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.53□□□□□ -2
CSB-PGBD3P0DP91 RNU6-949P-201ENST00000384040 107 ntBASIC2.53□□□□□ -2
CSB-PGBD3P0DP91 SNORD41-201ENST00000386967 70 ntBASIC2.53□□□□□ -2
CSB-PGBD3P0DP91 MIR1287-201ENST00000408492 90 ntBASIC2.53□□□□□ -2
CSB-PGBD3P0DP91 SNRPGP12-201ENST00000449481 213 ntBASIC2.53□□□□□ -2
CSB-PGBD3P0DP91 SNORD111.1-201ENST00000516421 86 ntBASIC2.53□□□□□ -2
CSB-PGBD3P0DP91 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.53□□□□□ -2
CSB-PGBD3P0DP91 RNU6-624P-201ENST00000363411 107 ntBASIC2.52□□□□□ -2.01
CSB-PGBD3P0DP91 MIR676-201ENST00000390702 67 ntBASIC2.52□□□□□ -2.01
CSB-PGBD3P0DP91 HSPE1P24-201ENST00000450782 238 ntBASIC2.52□□□□□ -2.01
CSB-PGBD3P0DP91 RNU6-523P-201ENST00000516304 54 ntBASIC2.52□□□□□ -2.01
CSB-PGBD3P0DP91 MIR4500-201ENST00000579472 76 ntBASIC2.52□□□□□ -2.01
CSB-PGBD3P0DP91 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.52□□□□□ -2.01
CSB-PGBD3P0DP91 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.52□□□□□ -2.01
CSB-PGBD3P0DP91 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CSB-PGBD3P0DP91 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.51□□□□□ -2.01
CSB-PGBD3P0DP91 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
CSB-PGBD3P0DP91 RNU6-850P-201ENST00000516934 103 ntBASIC2.51□□□□□ -2.01
CSB-PGBD3P0DP91 AL357312.1-201ENST00000603879 298 ntBASIC2.51□□□□□ -2.01
CSB-PGBD3P0DP91 AP000753.3-201ENST00000604083 169 ntBASIC2.51□□□□□ -2.01
CSB-PGBD3P0DP91 PRELID3BP2-201ENST00000605362 201 ntBASIC2.51□□□□□ -2.01
CSB-PGBD3P0DP91 Y_RNA.545-201ENST00000384652 105 ntBASIC2.5□□□□□ -2.01
CSB-PGBD3P0DP91 MIR9-3-201ENST00000385084 90 ntBASIC2.5□□□□□ -2.01
CSB-PGBD3P0DP91 AL096840.1-201ENST00000603287 93 ntBASIC2.5□□□□□ -2.01
CSB-PGBD3P0DP91 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CSB-PGBD3P0DP91 MIR302D-201ENST00000362275 68 ntBASIC2.49□□□□□ -2.01
CSB-PGBD3P0DP91 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CSB-PGBD3P0DP91 BX276092.1-201ENST00000427368 251 ntBASIC2.49□□□□□ -2.01
CSB-PGBD3P0DP91 snoU13.2-201ENST00000459201 104 ntBASIC2.49□□□□□ -2.01
CSB-PGBD3P0DP91 RNU6-250P-201ENST00000516958 103 ntBASIC2.49□□□□□ -2.01
CSB-PGBD3P0DP91 U6.109-201ENST00000636749 87 ntBASIC2.49□□□□□ -2.01
CSB-PGBD3P0DP91 RNA5SP160-201ENST00000364866 120 ntBASIC2.48□□□□□ -2.01
CSB-PGBD3P0DP91 Y_RNA.508-201ENST00000384502 114 ntBASIC2.48□□□□□ -2.01
CSB-PGBD3P0DP91 MIR1302-7-201ENST00000408841 72 ntBASIC2.48□□□□□ -2.01
CSB-PGBD3P0DP91 MIR514B-201ENST00000516774 80 ntBASIC2.48□□□□□ -2.01
CSB-PGBD3P0DP91 AL512598.1-201ENST00000610158 273 ntBASIC2.48□□□□□ -2.01
CSB-PGBD3P0DP91 GHRLOS.1-201ENST00000610995 70 ntBASIC2.48□□□□□ -2.01
CSB-PGBD3P0DP91 MIR7111-201ENST00000619751 72 ntBASIC2.48□□□□□ -2.01
CSB-PGBD3P0DP91 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 RNU6-1094P-201ENST00000362416 104 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 SNORD1A-201ENST00000364968 72 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 MIR588-201ENST00000384900 83 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 RNU4-62P-201ENST00000410125 130 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 SCARNA18B-201ENST00000458806 135 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 snoU13.11-201ENST00000459219 104 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 AC079140.2-201ENST00000506193 142 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 AC019176.1-201ENST00000518519 225 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 MIR3198-2-201ENST00000577868 80 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 MIR3192-201ENST00000584920 77 ntBASIC2.47□□□□□ -2.01
CSB-PGBD3P0DP91 RNU6-321P-201ENST00000410912 106 ntBASIC2.46□□□□□ -2.02
CSB-PGBD3P0DP91 Y_RNA.648-201ENST00000459455 110 ntBASIC2.46□□□□□ -2.02
CSB-PGBD3P0DP91 AC023790.1-201ENST00000482174 347 ntBASIC2.46□□□□□ -2.02
CSB-PGBD3P0DP91 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.46□□□□□ -2.02
CSB-PGBD3P0DP91 MIR6740-201ENST00000618268 113 ntBASIC2.46□□□□□ -2.02
CSB-PGBD3P0DP91 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CSB-PGBD3P0DP91 MIR337-201ENST00000362281 93 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 MIRLET7A1-201ENST00000362295 80 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 SNORA63.2-201ENST00000362603 126 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 SNORD33-201ENST00000362761 85 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 Y_RNA.119-201ENST00000363301 96 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 MIR563-201ENST00000385080 79 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 RNA5SP292-201ENST00000390974 118 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 MIR4796-201ENST00000580742 81 ntBASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.45□□□□□ -2.02
CSB-PGBD3P0DP91 RNA5SP48-201ENST00000363969 126 ntBASIC2.44□□□□□ -2.02
CSB-PGBD3P0DP91 AC114801.3-201ENST00000510231 177 ntBASIC2.44□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-557P-201ENST00000516842 110 ntBASIC2.44□□□□□ -2.02
CSB-PGBD3P0DP91 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.44□□□□□ -2.02
CSB-PGBD3P0DP91 MIR3134-201ENST00000579433 74 ntBASIC2.44□□□□□ -2.02
CSB-PGBD3P0DP91 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSB-PGBD3P0DP91 MIR30D-201ENST00000362283 70 ntBASIC2.43□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-571P-201ENST00000384128 107 ntBASIC2.43□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-947P-201ENST00000516264 106 ntBASIC2.43□□□□□ -2.02
CSB-PGBD3P0DP91 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.43□□□□□ -2.02
CSB-PGBD3P0DP91 MIR3937-201ENST00000580135 106 ntBASIC2.43□□□□□ -2.02
CSB-PGBD3P0DP91 AL096861.1-201ENST00000610899 123 ntBASIC2.43□□□□□ -2.02
CSB-PGBD3P0DP91 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CSB-PGBD3P0DP91 AL161722.3-201ENST00000605789 2983 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-161P-201ENST00000363051 106 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 SNORA25.3-201ENST00000363205 127 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 AP1B1P2-201ENST00000416196 106 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 AC025033.1-201ENST00000463883 194 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 AC079804.2-201ENST00000490376 200 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 RNU6-1108P-201ENST00000516308 104 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 MIR4303-201ENST00000581299 66 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 uc_338.6-201ENST00000613544 171 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 AP000553.5-201ENST00000641933 54 ntBASIC2.42□□□□□ -2.02
CSB-PGBD3P0DP91 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms