Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC131280.1-202ENST00000624067 4211 ntBASIC2.1□□□□□ -2.07
SOX1O00570 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SOX1O00570 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SOX1O00570 Y_RNA.36-201ENST00000362602 112 ntBASIC2.1□□□□□ -2.07
SOX1O00570 SNORA25.3-201ENST00000363205 127 ntBASIC2.1□□□□□ -2.07
SOX1O00570 RNU6-652P-201ENST00000365488 107 ntBASIC2.1□□□□□ -2.07
SOX1O00570 RNU6-24P-201ENST00000384440 107 ntBASIC2.1□□□□□ -2.07
SOX1O00570 MIR144-201ENST00000384886 86 ntBASIC2.1□□□□□ -2.07
SOX1O00570 MIR519C-201ENST00000385053 87 ntBASIC2.1□□□□□ -2.07
SOX1O00570 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
SOX1O00570 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
SOX1O00570 RNU6-857P-201ENST00000515893 110 ntBASIC2.1□□□□□ -2.07
SOX1O00570 RNU6-947P-201ENST00000516264 106 ntBASIC2.1□□□□□ -2.07
SOX1O00570 RNU11-2P-201ENST00000516898 142 ntBASIC2.1□□□□□ -2.07
SOX1O00570 AC090897.1-201ENST00000580909 226 ntBASIC2.1□□□□□ -2.07
SOX1O00570 AL512598.1-201ENST00000610158 273 ntBASIC2.1□□□□□ -2.07
SOX1O00570 MIR6740-201ENST00000618268 113 ntBASIC2.1□□□□□ -2.07
SOX1O00570 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SOX1O00570 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SOX1O00570 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
SOX1O00570 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.09□□□□□ -2.07
SOX1O00570 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
SOX1O00570 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SOX1O00570 MIR30D-201ENST00000362283 70 ntBASIC2.08□□□□□ -2.08
SOX1O00570 RNA5SP133-201ENST00000363368 119 ntBASIC2.08□□□□□ -2.08
SOX1O00570 RNU6-519P-201ENST00000410590 108 ntBASIC2.08□□□□□ -2.08
SOX1O00570 RNU1-123P-201ENST00000458950 160 ntBASIC2.08□□□□□ -2.08
SOX1O00570 AC093729.1-201ENST00000513074 128 ntBASIC2.08□□□□□ -2.08
SOX1O00570 RNA5SP402-201ENST00000517148 110 ntBASIC2.08□□□□□ -2.08
SOX1O00570 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
SOX1O00570 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SOX1O00570 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SOX1O00570 Y_RNA.119-201ENST00000363301 96 ntBASIC2.07□□□□□ -2.08
SOX1O00570 SNORD115-27-201ENST00000364430 82 ntBASIC2.07□□□□□ -2.08
SOX1O00570 RNU6-1165P-201ENST00000410119 107 ntBASIC2.07□□□□□ -2.08
SOX1O00570 SNRPGP12-201ENST00000449481 213 ntBASIC2.07□□□□□ -2.08
SOX1O00570 RNU7-62P-201ENST00000458856 62 ntBASIC2.07□□□□□ -2.08
SOX1O00570 snoU13.25-201ENST00000458945 104 ntBASIC2.07□□□□□ -2.08
SOX1O00570 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.07□□□□□ -2.08
SOX1O00570 AP003716.2-201ENST00000528260 108 ntBASIC2.07□□□□□ -2.08
SOX1O00570 MIR4287-201ENST00000579398 78 ntBASIC2.07□□□□□ -2.08
SOX1O00570 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
SOX1O00570 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.07□□□□□ -2.08
SOX1O00570 U6.109-201ENST00000636749 87 ntBASIC2.07□□□□□ -2.08
SOX1O00570 RNU6-571P-201ENST00000384128 107 ntBASIC2.06□□□□□ -2.08
SOX1O00570 RNU6-524P-201ENST00000384270 107 ntBASIC2.06□□□□□ -2.08
SOX1O00570 MT-TF-201ENST00000387314 71 ntBASIC2.06□□□□□ -2.08
SOX1O00570 RNU6-205P-201ENST00000390858 107 ntBASIC2.06□□□□□ -2.08
SOX1O00570 RPL30P7-201ENST00000479312 323 ntBASIC2.06□□□□□ -2.08
SOX1O00570 RNU6-850P-201ENST00000516934 103 ntBASIC2.06□□□□□ -2.08
SOX1O00570 AC121758.2-201ENST00000553271 193 ntBASIC2.06□□□□□ -2.08
SOX1O00570 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.06□□□□□ -2.08
SOX1O00570 AC008163.1-202ENST00000636004 2889 ntBASIC2.05□□□□□ -2.08
SOX1O00570 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
SOX1O00570 Y_RNA.30-201ENST00000362572 97 ntBASIC2.05□□□□□ -2.08
SOX1O00570 Y_RNA.57-201ENST00000362806 113 ntBASIC2.05□□□□□ -2.08
SOX1O00570 SNORD115-37-201ENST00000363768 82 ntBASIC2.05□□□□□ -2.08
SOX1O00570 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SOX1O00570 RNU4-83P-201ENST00000410863 133 ntBASIC2.05□□□□□ -2.08
SOX1O00570 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
SOX1O00570 AC019288.1-201ENST00000557918 224 ntBASIC2.05□□□□□ -2.08
SOX1O00570 MIR6516-201ENST00000630554 81 ntBASIC2.05□□□□□ -2.08
SOX1O00570 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SOX1O00570 Y_RNA.316-201ENST00000365118 111 ntBASIC2.04□□□□□ -2.08
SOX1O00570 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SOX1O00570 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.04□□□□□ -2.08
SOX1O00570 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.04□□□□□ -2.08
SOX1O00570 AL596028.1-201ENST00000326971 197 ntBASIC2.03□□□□□ -2.08
SOX1O00570 MIR377-201ENST00000362145 69 ntBASIC2.03□□□□□ -2.08
SOX1O00570 RNA5SP264-201ENST00000363115 107 ntBASIC2.03□□□□□ -2.08
SOX1O00570 Y_RNA.221-201ENST00000364248 96 ntBASIC2.03□□□□□ -2.08
SOX1O00570 MIR1236-201ENST00000408340 102 ntBASIC2.03□□□□□ -2.08
SOX1O00570 MIR1185-1-201ENST00000408598 86 ntBASIC2.03□□□□□ -2.08
SOX1O00570 AC087499.7-201ENST00000441958 109 ntBASIC2.03□□□□□ -2.08
SOX1O00570 snoU13.9-201ENST00000458927 103 ntBASIC2.03□□□□□ -2.08
SOX1O00570 SNORD4B-201ENST00000459083 72 ntBASIC2.03□□□□□ -2.08
SOX1O00570 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
SOX1O00570 MIR8063-201ENST00000621930 81 ntBASIC2.03□□□□□ -2.08
SOX1O00570 MIR4662A-201ENST00000637499 67 ntBASIC2.03□□□□□ -2.08
SOX1O00570 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SOX1O00570 BX276092.1-201ENST00000427368 251 ntBASIC2.02□□□□□ -2.09
SOX1O00570 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SOX1O00570 MIR103A2-201ENST00000362154 78 ntBASIC2.01□□□□□ -2.09
SOX1O00570 SNORD33-201ENST00000362761 85 ntBASIC2.01□□□□□ -2.09
SOX1O00570 RNU6-580P-201ENST00000365159 107 ntBASIC2.01□□□□□ -2.09
SOX1O00570 RNU6-1296P-201ENST00000383879 107 ntBASIC2.01□□□□□ -2.09
SOX1O00570 AC140658.3-201ENST00000567603 271 ntBASIC2.01□□□□□ -2.09
SOX1O00570 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
SOX1O00570 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
SOX1O00570 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
SOX1O00570 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2□□□□□ -2.09
SOX1O00570 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
SOX1O00570 SNORD1A-201ENST00000364968 72 ntBASIC2□□□□□ -2.09
SOX1O00570 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2□□□□□ -2.09
SOX1O00570 MIR18B-201ENST00000454574 71 ntBASIC2□□□□□ -2.09
SOX1O00570 SNORA44.1-201ENST00000517031 108 ntBASIC2□□□□□ -2.09
SOX1O00570 MIR4285-201ENST00000581001 85 ntBASIC2□□□□□ -2.09
SOX1O00570 AC103810.8-201ENST00000607347 118 ntBASIC2□□□□□ -2.09
SOX1O00570 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SOX1O00570 MIR302D-201ENST00000362275 68 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms