Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORD115-35-201ENST00000365122 82 ntBASIC1.64□□□□□ -2.15
CTDP1Q9Y5B0 AL133373.1-201ENST00000497098 94 ntBASIC1.64□□□□□ -2.15
CTDP1Q9Y5B0 SCARNA23-201ENST00000516060 130 ntBASIC1.64□□□□□ -2.15
CTDP1Q9Y5B0 RNU7-2P-201ENST00000516096 62 ntBASIC1.64□□□□□ -2.15
CTDP1Q9Y5B0 AL353770.2-201ENST00000620024 78 ntBASIC1.64□□□□□ -2.15
CTDP1Q9Y5B0 MIR206-201ENST00000384872 86 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 MIR1302-7-201ENST00000408841 72 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 Y_RNA.601-201ENST00000410500 113 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 AC244023.1-201ENST00000426884 112 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 AL353813.1-201ENST00000440700 253 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-1018P-201ENST00000516577 106 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 SNORD67.1-201ENST00000516618 108 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 AC242498.1-201ENST00000604134 111 ntBASIC1.63□□□□□ -2.15
CTDP1Q9Y5B0 Y_RNA.107-201ENST00000363190 121 ntBASIC1.62□□□□□ -2.15
CTDP1Q9Y5B0 snoU13.25-201ENST00000458945 104 ntBASIC1.62□□□□□ -2.15
CTDP1Q9Y5B0 MIR2115-201ENST00000516657 100 ntBASIC1.62□□□□□ -2.15
CTDP1Q9Y5B0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.62□□□□□ -2.15
CTDP1Q9Y5B0 MIR5582-201ENST00000579697 68 ntBASIC1.62□□□□□ -2.15
CTDP1Q9Y5B0 AP000753.3-201ENST00000604083 169 ntBASIC1.62□□□□□ -2.15
CTDP1Q9Y5B0 MIR6078-201ENST00000611069 100 ntBASIC1.62□□□□□ -2.15
CTDP1Q9Y5B0 MIR103A2-201ENST00000362154 78 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 Y_RNA.93-201ENST00000363066 109 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 MIR588-201ENST00000384900 83 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 snoU13.2-201ENST00000459201 104 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 AC141846.1-201ENST00000568348 142 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 MIR3664-201ENST00000579074 99 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 MIR4264-201ENST00000583520 66 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 AC006254.2-201ENST00000603259 279 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 AL662814.1-201ENST00000617364 121 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 MIR2052-201ENST00000636055 55 ntBASIC1.61□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-1313P-201ENST00000362622 102 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 RNA5SP264-201ENST00000363115 107 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 SNORD114-10-201ENST00000363409 72 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 RNY1P13-201ENST00000365030 105 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-1201P-201ENST00000384227 107 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 MTATP8P2-201ENST00000435212 202 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 RNU7-137P-201ENST00000516788 62 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-158P-201ENST00000517104 100 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 AL442128.1-201ENST00000615151 90 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 AC105081.1-201ENST00000617727 106 ntBASIC1.6□□□□□ -2.15
CTDP1Q9Y5B0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-865P-201ENST00000364772 107 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 SNORA25.9-201ENST00000365087 128 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 Y_RNA.377-201ENST00000365644 108 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 MIR150-201ENST00000385048 84 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 RNU6-205P-201ENST00000390858 107 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 MIR1287-201ENST00000408492 90 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 RPS27P16-201ENST00000425758 201 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 Y_RNA.659-201ENST00000515994 113 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 RNU11-2P-201ENST00000516898 142 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 AP003716.2-201ENST00000528260 108 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 AL512310.8-201ENST00000550183 120 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 AC096720.1-201ENST00000604441 183 ntBASIC1.59□□□□□ -2.15
CTDP1Q9Y5B0 SNORD45B-201ENST00000364617 72 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 Y_RNA.369-201ENST00000365568 117 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1307P-201ENST00000391012 103 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 MIR1185-1-201ENST00000408598 86 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-447P-201ENST00000410293 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1076P-201ENST00000410397 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-355P-201ENST00000410427 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-791P-201ENST00000410467 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-705P-201ENST00000410601 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1100P-201ENST00000410691 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-860P-201ENST00000410860 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1217P-201ENST00000411276 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-785P-201ENST00000411324 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 U6.90-201ENST00000614007 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 MIR8070-201ENST00000616510 88 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 U6.70-201ENST00000620287 104 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 MIR6516-201ENST00000630554 81 ntBASIC1.58□□□□□ -2.16
CTDP1Q9Y5B0 MT-TN-201ENST00000387400 73 ntBASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 RNU7-62P-201ENST00000458856 62 ntBASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-795P-201ENST00000516323 103 ntBASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-165P-201ENST00000517170 99 ntBASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 MIR6740-201ENST00000618268 113 ntBASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CTDP1Q9Y5B0 MIR26B-201ENST00000362251 77 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-170P-201ENST00000362832 104 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-392P-201ENST00000364926 101 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1131P-201ENST00000364955 107 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 MIR618-201ENST00000385287 98 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 RPS29P28-201ENST00000446439 141 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 AC133485.1-201ENST00000567176 124 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 AC012531.4-201ENST00000616509 177 ntBASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CTDP1Q9Y5B0 Y_RNA.98-201ENST00000363109 102 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-654P-201ENST00000364373 107 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-949P-201ENST00000384040 107 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 Y_RNA.466-201ENST00000384294 113 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 MIR34C-201ENST00000384831 77 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 MIR499A-201ENST00000384903 122 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms