Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.59□□□□□ -2.5
CLN6Q9NWW5 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.59□□□□□ -2.5
CLN6Q9NWW5 AL162726.3-218ENST00000636401 95 ntBASIC-0.59□□□□□ -2.5
CLN6Q9NWW5 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 SNORD114-10-201ENST00000363409 72 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 RNA5SP457-201ENST00000363657 124 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 RNU6-103P-201ENST00000363686 107 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 MIR635-201ENST00000384830 98 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 MIR599-201ENST00000385069 95 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 MIR876-201ENST00000401147 81 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 HMGN2P22-201ENST00000427588 175 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 AC109327.2-201ENST00000448339 378 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 RNA5SP480-201ENST00000516840 109 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 AC105081.1-201ENST00000617727 106 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 AL365265.1-201ENST00000621045 234 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.6□□□□□ -2.51
CLN6Q9NWW5 SNORD115-2-201ENST00000362842 82 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 RNU6-978P-201ENST00000364371 103 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 SNORD115-20-201ENST00000365099 82 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 MIR196A2-201ENST00000385189 110 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 MT-TD-201ENST00000387419 68 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 RNU6-651P-201ENST00000411040 105 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 MIR4263-201ENST00000584745 83 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 AC006504.6-201ENST00000590142 199 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 MIR8064-201ENST00000612863 90 ntBASIC-0.61□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 RNU6-449P-201ENST00000383914 107 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 MIR516B1-201ENST00000385211 90 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 BX276092.1-201ENST00000427368 251 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 RNA5SP484-201ENST00000458857 111 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 SNORA25.13-201ENST00000516395 103 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 AL442663.2-201ENST00000554385 511 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 AC113195.1-201ENST00000579952 141 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 AL359881.1-201ENST00000602916 267 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 MIR4788-201ENST00000639104 80 ntBASIC-0.62□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.63□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.63□□□□□ -2.51
CLN6Q9NWW5 AC097635.1-201ENST00000450678 155 ntBASIC-0.63□□□□□ -2.51
CLN6Q9NWW5 MIR548AE2-201ENST00000583456 67 ntBASIC-0.63□□□□□ -2.51
CLN6Q9NWW5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.63□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.63□□□□□ -2.51
CLN6Q9NWW5 U2.14-201ENST00000615943 113 ntBASIC-0.63□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.64□□□□□ -2.51
CLN6Q9NWW5 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
CLN6Q9NWW5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.64□□□□□ -2.51
CLN6Q9NWW5 MIR655-201ENST00000362159 97 ntBASIC-0.65□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.65□□□□□ -2.51
CLN6Q9NWW5 RNU6-811P-201ENST00000384069 107 ntBASIC-0.65□□□□□ -2.51
CLN6Q9NWW5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.65□□□□□ -2.51
CLN6Q9NWW5 AC244250.2-201ENST00000418731 148 ntBASIC-0.65□□□□□ -2.51
CLN6Q9NWW5 TRAJ51-201ENST00000504127 63 ntBASIC-0.65□□□□□ -2.51
CLN6Q9NWW5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
CLN6Q9NWW5 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 RNU7-74P-201ENST00000459104 62 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 RNA5SP285-201ENST00000516619 119 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 MIR4500-201ENST00000579472 76 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 MIR4744-201ENST00000581563 82 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 MIR548AZ-201ENST00000616567 95 ntBASIC-0.66□□□□□ -2.52
CLN6Q9NWW5 RNA5SP257-201ENST00000363023 116 ntBASIC-0.67□□□□□ -2.52
CLN6Q9NWW5 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.67□□□□□ -2.52
CLN6Q9NWW5 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.67□□□□□ -2.52
CLN6Q9NWW5 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.67□□□□□ -2.52
CLN6Q9NWW5 RNU6-865P-201ENST00000364772 107 ntBASIC-0.67□□□□□ -2.52
CLN6Q9NWW5 MIR548S-201ENST00000581352 82 ntBASIC-0.67□□□□□ -2.52
CLN6Q9NWW5 AL590491.3-201ENST00000610731 82 ntBASIC-0.67□□□□□ -2.52
CLN6Q9NWW5 SNORA25.7-201ENST00000364375 127 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 RNU6-690P-201ENST00000365242 106 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 RNU6-474P-201ENST00000384243 107 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 SNORA32.3-201ENST00000384772 121 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 AC022028.1-201ENST00000412054 408 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 MTND4LP11-201ENST00000422184 280 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 RNU7-13P-201ENST00000516413 62 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
CLN6Q9NWW5 RNA5SP205-201ENST00000364653 136 ntBASIC-0.69□□□□□ -2.52
CLN6Q9NWW5 MIR4282-201ENST00000583613 67 ntBASIC-0.69□□□□□ -2.52
CLN6Q9NWW5 MIR6507-201ENST00000613630 70 ntBASIC-0.69□□□□□ -2.52
CLN6Q9NWW5 uc_338.36-201ENST00000622331 158 ntBASIC-0.69□□□□□ -2.52
CLN6Q9NWW5 MIR6759-201ENST00000638110 65 ntBASIC-0.69□□□□□ -2.52
CLN6Q9NWW5 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.7□□□□□ -2.52
CLN6Q9NWW5 MIR3920-201ENST00000581751 86 ntBASIC-0.7□□□□□ -2.52
CLN6Q9NWW5 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 233.1 ms