Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORA20-201ENST00000384662 132 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 RNA5SP25-201ENST00000410815 110 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 RNA5SP144-201ENST00000410846 116 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 RNU5E-9P-201ENST00000411164 104 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 RPL39P25-201ENST00000449384 154 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 RNU6-531P-201ENST00000516694 104 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 RNU7-35P-201ENST00000517174 62 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 IGLVI-20-201ENST00000519296 130 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 MIR4752-201ENST00000579672 72 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 AC244669.1-204ENST00000621564 178 ntBASIC0.03□□□□□ -2.4
RPAP1Q9BWH6 Y_RNA.47-201ENST00000362697 108 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 SNORA63.5-201ENST00000363548 123 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 MTND2P23-201ENST00000422990 651 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 AC108059.2-201ENST00000434626 151 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 AL117187.1-201ENST00000555482 181 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 AC006504.6-201ENST00000590142 199 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 TUG1_4.1-201ENST00000619464 181 ntBASIC0.02□□□□□ -2.41
RPAP1Q9BWH6 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.120-201ENST00000363304 110 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.562-201ENST00000384695 113 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 MIR606-201ENST00000384851 96 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 MIR568-201ENST00000385036 95 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 SNORD58.1-201ENST00000391313 66 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 MIR548H2-201ENST00000408874 88 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 MIR1270-201ENST00000459320 83 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.797-201ENST00000515977 94 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 RNA5SP236-201ENST00000516169 116 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 RNA5SP227-201ENST00000516184 113 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 MIR4639-201ENST00000584938 69 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 AL359881.1-201ENST00000602916 267 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.01□□□□□ -2.41
RPAP1Q9BWH6 SNORD115-2-201ENST00000362842 82 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 RNA5SP133-201ENST00000363368 119 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 SNORD115-20-201ENST00000365099 82 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 RNU6-1126P-201ENST00000384002 107 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 RNU6-643P-201ENST00000384018 107 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.422-201ENST00000384054 114 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.571-201ENST00000384753 98 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.626-201ENST00000411288 95 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 RNU7-70P-201ENST00000516941 66 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 AC138749.4-201ENST00000563970 127 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 AC008737.2-201ENST00000599446 118 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 U6.106-201ENST00000636360 105 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 AC091304.10-201ENST00000641554 121 ntBASIC0□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 RNU6-702P-201ENST00000364982 107 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 SNORA32-201ENST00000384072 121 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 RNY1P6-201ENST00000384193 109 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 RNU6-738P-201ENST00000384531 106 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 AL022718.1-201ENST00000412004 84 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 RNU2-35P-201ENST00000516446 142 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 AL627230.5-201ENST00000619807 58 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 MIR499B-201ENST00000636498 73 ntBASIC-0.01□□□□□ -2.41
RPAP1Q9BWH6 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 SNORD27-201ENST00000363981 72 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 RNU7-113P-201ENST00000459273 62 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 RNU6-758P-201ENST00000516292 89 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 SNORD67.1-201ENST00000516618 108 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 RNA5SP33-201ENST00000516687 98 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 RNU7-137P-201ENST00000516788 62 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 MIR548AE2-201ENST00000583456 67 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 U6.109-201ENST00000636749 87 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 U6.104-201ENST00000637979 90 ntBASIC-0.02□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-508P-201ENST00000363231 103 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNY1P11-201ENST00000363759 113 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-726P-201ENST00000364680 107 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-275P-201ENST00000364910 107 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-768P-201ENST00000384683 107 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 MIR643-201ENST00000385267 97 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 MIR760-201ENST00000390220 80 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-918P-201ENST00000391219 106 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 snoU13.19-201ENST00000459148 104 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RPL39P34-201ENST00000477141 156 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU6-135P-201ENST00000516769 101 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU7-161P-201ENST00000517289 62 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 RNU2-60P-201ENST00000517290 128 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 AC105081.1-201ENST00000617727 106 ntBASIC-0.03□□□□□ -2.41
RPAP1Q9BWH6 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.04□□□□□ -2.42
RPAP1Q9BWH6 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms