Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNU6-162P-201ENST00000516228 103 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 RNU7-137P-201ENST00000516788 62 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 AC019176.1-201ENST00000518519 225 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 SNORA4-201ENST00000584302 138 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 MIR548Z-201ENST00000584743 97 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 AP000753.3-201ENST00000604083 169 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 MIR376B-201ENST00000614515 100 ntBASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PRPF40BQ6NWY9 AL161722.3-201ENST00000605789 2983 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 SNORD33-201ENST00000362761 85 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 SNORA26.2-201ENST00000390922 122 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-447P-201ENST00000410293 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-1118P-201ENST00000410382 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-1076P-201ENST00000410397 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-355P-201ENST00000410427 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-791P-201ENST00000410467 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-705P-201ENST00000410601 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-1100P-201ENST00000410691 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-860P-201ENST00000410860 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-1217P-201ENST00000411276 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-785P-201ENST00000411324 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 Y_RNA.705-201ENST00000516862 110 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 AC141846.1-201ENST00000568348 142 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 U6.90-201ENST00000614007 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 U7.3-201ENST00000616123 62 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 U6.70-201ENST00000620287 104 ntBASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRPF40BQ6NWY9 SNORD38.1-201ENST00000363863 68 ntBASIC2.12□□□□□ -2.07
PRPF40BQ6NWY9 Y_RNA.290-201ENST00000364879 114 ntBASIC2.12□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-1321P-201ENST00000390905 107 ntBASIC2.12□□□□□ -2.07
PRPF40BQ6NWY9 RNU7-48P-201ENST00000458875 63 ntBASIC2.12□□□□□ -2.07
PRPF40BQ6NWY9 AC005908.1-201ENST00000468701 347 ntBASIC2.12□□□□□ -2.07
PRPF40BQ6NWY9 AC133485.1-201ENST00000567176 124 ntBASIC2.12□□□□□ -2.07
PRPF40BQ6NWY9 AL662814.1-201ENST00000617364 121 ntBASIC2.12□□□□□ -2.07
PRPF40BQ6NWY9 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 SNORD48-201ENST00000364953 64 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 RNY1P13-201ENST00000365030 105 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 SNORD38.2-201ENST00000384470 69 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 MIR34C-201ENST00000384831 77 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-1307P-201ENST00000391012 103 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 AC079140.2-201ENST00000506193 142 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 MIR2115-201ENST00000516657 100 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-762P-201ENST00000517107 102 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 AC026421.1-201ENST00000519101 163 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 MIR3198-2-201ENST00000577868 80 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 MIR3937-201ENST00000580135 106 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 PRELID3BP2-201ENST00000605362 201 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.11□□□□□ -2.07
PRPF40BQ6NWY9 Y_RNA.327-201ENST00000365201 102 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 Y_RNA.467-201ENST00000384297 102 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 MIR588-201ENST00000384900 83 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 UBL5P1-201ENST00000507979 193 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 MIR4264-201ENST00000583520 66 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 MIR4777-201ENST00000583710 86 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 MIR4439-201ENST00000583746 80 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 AL645939.4-201ENST00000604495 135 ntBASIC2.1□□□□□ -2.07
PRPF40BQ6NWY9 Y_RNA.98-201ENST00000363109 102 ntBASIC2.09□□□□□ -2.07
PRPF40BQ6NWY9 RNU6-887P-201ENST00000410660 100 ntBASIC2.09□□□□□ -2.07
PRPF40BQ6NWY9 snoU13.2-201ENST00000459201 104 ntBASIC2.09□□□□□ -2.07
PRPF40BQ6NWY9 AP001362.1-201ENST00000625165 124 ntBASIC2.09□□□□□ -2.07
PRPF40BQ6NWY9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.09□□□□□ -2.07
PRPF40BQ6NWY9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 MIR103A2-201ENST00000362154 78 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 Y_RNA.247-201ENST00000364500 92 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-392P-201ENST00000364926 101 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-205P-201ENST00000390858 107 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-972P-201ENST00000391208 107 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 MIR1276-201ENST00000408707 83 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 RNY4P29-201ENST00000410801 97 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 AC244023.1-201ENST00000426884 112 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 AC109327.2-201ENST00000448339 378 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 RNA5SP480-201ENST00000516840 109 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 AC242498.1-201ENST00000604134 111 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.08□□□□□ -2.08
PRPF40BQ6NWY9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PRPF40BQ6NWY9 MIR302D-201ENST00000362275 68 ntBASIC2.07□□□□□ -2.08
PRPF40BQ6NWY9 RNA5SP325-201ENST00000363756 130 ntBASIC2.07□□□□□ -2.08
PRPF40BQ6NWY9 Y_RNA.540-201ENST00000384638 111 ntBASIC2.07□□□□□ -2.08
PRPF40BQ6NWY9 SPINT5P-201ENST00000448174 155 ntBASIC2.07□□□□□ -2.08
PRPF40BQ6NWY9 RPL30P7-201ENST00000479312 323 ntBASIC2.07□□□□□ -2.08
PRPF40BQ6NWY9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PRPF40BQ6NWY9 SNORD1A-201ENST00000364968 72 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-949P-201ENST00000384040 107 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-813P-201ENST00000384691 107 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 MIR1302-7-201ENST00000408841 72 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 RNU7-62P-201ENST00000458856 62 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 AL133373.1-201ENST00000497098 94 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 RNU6-1006P-201ENST00000516998 103 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 MTND5P40-201ENST00000559945 246 ntBASIC2.06□□□□□ -2.08
PRPF40BQ6NWY9 RNU1-42P-201ENST00000364033 160 ntBASIC2.05□□□□□ -2.08
PRPF40BQ6NWY9 MIR450A2-201ENST00000385022 100 ntBASIC2.05□□□□□ -2.08
PRPF40BQ6NWY9 MT-TN-201ENST00000387400 73 ntBASIC2.05□□□□□ -2.08
PRPF40BQ6NWY9 MIR548G-201ENST00000408442 89 ntBASIC2.05□□□□□ -2.08
PRPF40BQ6NWY9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms