Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNA5SP237-201ENST00000410414 113 ntBASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 MTATP6P21-201ENST00000440681 189 ntBASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 RNU7-123P-201ENST00000515911 60 ntBASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 RNU7-200P-201ENST00000516105 62 ntBASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 AC022523.2-201ENST00000561045 150 ntBASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 AC141846.1-201ENST00000568348 142 ntBASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.71□□□□□ -2.3
LYSMD4Q5XG99 RNY1P13-201ENST00000365030 105 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 RNU6-209P-201ENST00000384118 107 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 MIR520H-201ENST00000385126 88 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 AL022718.1-201ENST00000412004 84 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 AC096949.1-201ENST00000412047 152 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 MIR18B-201ENST00000454574 71 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 RNU7-56P-201ENST00000458744 62 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 RNU7-164P-201ENST00000459221 62 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 MIR1270-201ENST00000459320 83 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 RNA5SP33-201ENST00000516687 98 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 MIR3121-201ENST00000579680 77 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 MIR548AE2-201ENST00000583456 67 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 AC010487.4-201ENST00000637027 61 ntBASIC0.7□□□□□ -2.3
LYSMD4Q5XG99 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.464-201ENST00000384282 110 ntBASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.506-201ENST00000384494 102 ntBASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 RNU6-1104P-201ENST00000384723 104 ntBASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 MIR125B2-201ENST00000385128 89 ntBASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
LYSMD4Q5XG99 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.531-201ENST00000384589 121 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 MIR1257-201ENST00000408490 117 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 SNORD93-201ENST00000408813 74 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 RNU6-1086P-201ENST00000410930 100 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 RNU7-79P-201ENST00000516082 62 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 RNU7-156P-201ENST00000517214 74 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 AC011603.4-201ENST00000611325 277 ntBASIC0.68□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.30-201ENST00000362572 97 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 RNU6-774P-201ENST00000363238 107 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.114-201ENST00000363265 113 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.298-201ENST00000364960 107 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 RNY1P8-201ENST00000383970 114 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.488-201ENST00000384403 102 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 MT-TF-201ENST00000387314 71 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 RNU7-102P-201ENST00000458948 62 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 RNY4P20-201ENST00000516678 93 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 RNU6-1212P-201ENST00000517023 104 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 AP001328.1-201ENST00000528550 176 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 AL137067.1-201ENST00000615933 120 ntBASIC0.67□□□□□ -2.3
LYSMD4Q5XG99 SNORD115-2-201ENST00000362842 82 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 SNORD115-20-201ENST00000365099 82 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 MT-TI-201ENST00000387365 69 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 MIR938-201ENST00000401216 83 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 Y_RNA.617-201ENST00000410920 90 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 RNU7-35P-201ENST00000517174 62 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 MIR4711-201ENST00000578274 70 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 AL359881.1-201ENST00000602916 267 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 MIR924-201ENST00000638017 53 ntBASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
LYSMD4Q5XG99 RNU6-403P-201ENST00000363163 104 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 RNA5SP457-201ENST00000363657 124 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 RNU6-949P-201ENST00000384040 107 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 RNU6-364P-201ENST00000384387 107 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 RNU1-119P-201ENST00000391122 165 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.588-201ENST00000391254 102 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 RNU4-83P-201ENST00000410863 133 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.692-201ENST00000516627 105 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 MIR4491-201ENST00000581087 68 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 MIR8066-201ENST00000617280 78 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 AC105081.1-201ENST00000617727 106 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
LYSMD4Q5XG99 RNU6-235P-201ENST00000362644 107 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 MTND4LP9-201ENST00000427694 174 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 RPL39P25-201ENST00000449384 154 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 SNORD67.1-201ENST00000516618 108 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 SNORA25.16-201ENST00000516741 121 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 AP001340.1-201ENST00000624405 217 ntBASIC0.64□□□□□ -2.31
LYSMD4Q5XG99 HSBP1P2-201ENST00000299671 229 ntBASIC0.63□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.13-201ENST00000362403 112 ntBASIC0.63□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.115-201ENST00000363272 98 ntBASIC0.63□□□□□ -2.31
LYSMD4Q5XG99 MIR573-201ENST00000384964 99 ntBASIC0.63□□□□□ -2.31
LYSMD4Q5XG99 RNU6-257P-201ENST00000410238 98 ntBASIC0.63□□□□□ -2.31
LYSMD4Q5XG99 RNU6-781P-201ENST00000516377 101 ntBASIC0.63□□□□□ -2.31
LYSMD4Q5XG99 SNORD92-201ENST00000585078 85 ntBASIC0.63□□□□□ -2.31
LYSMD4Q5XG99 SNORA72.6-201ENST00000384520 129 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 Y_RNA.568-201ENST00000384742 113 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 MIR1263-201ENST00000408324 86 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-447P-201ENST00000410293 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-1118P-201ENST00000410382 104 ntBASIC0.62□□□□□ -2.31
LYSMD4Q5XG99 RNU6-1076P-201ENST00000410397 104 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms