Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
FOXF1Q12946 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 RNA5SP257-201ENST00000363023 116 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 RNU6-978P-201ENST00000364371 103 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
FOXF1Q12946 RNU6-381P-201ENST00000391259 108 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 MTND5P20-201ENST00000448677 143 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 RNU7-159P-201ENST00000459284 62 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 AC113195.1-201ENST00000579952 141 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 MIR3681-201ENST00000580089 72 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 MIR4473-201ENST00000583731 91 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 RNU6-86P-201ENST00000606534 107 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 AC145423.2-201ENST00000610631 239 ntBASIC-0.18□□□□□ -2.44
FOXF1Q12946 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 RNU6-811P-201ENST00000384069 107 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 MIR516B1-201ENST00000385211 90 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 SNORA49-201ENST00000386157 136 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 SNORD41.1-201ENST00000391000 69 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 MIR548L-201ENST00000408303 86 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 RNA5SP144-201ENST00000410846 116 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 AC006210.1-201ENST00000424882 111 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 AC244505.6-201ENST00000452829 130 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 RNU2-35P-201ENST00000516446 142 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 RNA5SP33-201ENST00000516687 98 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 RNU7-137P-201ENST00000516788 62 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 RNU7-188P-201ENST00000517063 64 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 MIR3920-201ENST00000581751 86 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 MIR548AE2-201ENST00000583456 67 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 AL356055.1-201ENST00000602528 446 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 U7.6-201ENST00000610841 64 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 MIR8064-201ENST00000612863 90 ntBASIC-0.19□□□□□ -2.44
FOXF1Q12946 MIR101-2-201ENST00000362195 79 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNU4-58P-201ENST00000363192 141 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNU6-652P-201ENST00000365488 107 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNU6-571P-201ENST00000384128 107 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 SNORD56B-201ENST00000384713 71 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 MT-TI-201ENST00000387365 69 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNA5SP300-201ENST00000391197 107 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 MIR876-201ENST00000401147 81 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 AL022718.1-201ENST00000412004 84 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNU7-195P-201ENST00000458793 62 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNU6-320P-201ENST00000516511 106 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 RNA5SP285-201ENST00000516619 119 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 MIR4500-201ENST00000579472 76 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 MIR378D2-201ENST00000580636 98 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 MIR8068-201ENST00000618032 68 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.2□□□□□ -2.44
FOXF1Q12946 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.2□□□□□ -2.44
FOXF1Q12946 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 RNA5SP275-201ENST00000363936 118 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 SNORD49B-201ENST00000365172 72 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 MIR539-201ENST00000365690 78 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 MIR214-201ENST00000385214 110 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 MT-TW-201ENST00000387382 68 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 SNORD110-201ENST00000408189 75 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 AC096531.1-201ENST00000419107 107 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 AL121914.1-201ENST00000450188 156 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 RNU7-113P-201ENST00000459273 62 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 IGLVI-20-201ENST00000519296 130 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 MIR4680-201ENST00000580906 66 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 MIR548S-201ENST00000581352 82 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 MIR4788-201ENST00000639104 80 ntBASIC-0.21□□□□□ -2.44
FOXF1Q12946 SNORD114-31-201ENST00000363219 75 ntBASIC-0.22□□□□□ -2.44
FOXF1Q12946 SNORA18.1-201ENST00000363418 128 ntBASIC-0.22□□□□□ -2.44
FOXF1Q12946 MIR582-201ENST00000365731 98 ntBASIC-0.22□□□□□ -2.44
FOXF1Q12946 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.22□□□□□ -2.44
FOXF1Q12946 MIR9-2-201ENST00000384838 87 ntBASIC-0.22□□□□□ -2.44
FOXF1Q12946 MIR519E-201ENST00000385075 84 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms