Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNU6-850P-201ENST00000516934 103 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.26□□□□□ -2.05
EPHA4P54764 MIR1273D-201ENST00000577266 86 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 MIR4299-201ENST00000577899 72 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 AL512598.1-201ENST00000610158 273 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 MIR6895-201ENST00000613497 78 ntBASIC2.26□□□□□ -2.05
EPHA4P54764 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
EPHA4P54764 RNA5SP264-201ENST00000363115 107 ntBASIC2.24□□□□□ -2.05
EPHA4P54764 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
EPHA4P54764 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.24□□□□□ -2.05
EPHA4P54764 AC079140.2-201ENST00000506193 142 ntBASIC2.24□□□□□ -2.05
EPHA4P54764 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.24□□□□□ -2.05
EPHA4P54764 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.24□□□□□ -2.05
EPHA4P54764 MIR6516-201ENST00000630554 81 ntBASIC2.24□□□□□ -2.05
EPHA4P54764 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
EPHA4P54764 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
EPHA4P54764 AC008163.1-202ENST00000636004 2889 ntBASIC2.23□□□□□ -2.05
EPHA4P54764 MIR30A-201ENST00000385092 71 ntBASIC2.23□□□□□ -2.05
EPHA4P54764 MIR1236-201ENST00000408340 102 ntBASIC2.23□□□□□ -2.05
EPHA4P54764 MIR1261-201ENST00000408659 82 ntBASIC2.23□□□□□ -2.05
EPHA4P54764 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.23□□□□□ -2.05
EPHA4P54764 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
EPHA4P54764 AC019288.1-201ENST00000557918 224 ntBASIC2.23□□□□□ -2.05
EPHA4P54764 MIR4648-201ENST00000580107 72 ntBASIC2.23□□□□□ -2.05
EPHA4P54764 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
EPHA4P54764 SNORD115-27-201ENST00000364430 82 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 SNORA72.6-201ENST00000384520 129 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
EPHA4P54764 BX276092.1-201ENST00000427368 251 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 MIR18B-201ENST00000454574 71 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 MIR3937-201ENST00000580135 106 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 AC020891.4-201ENST00000605745 93 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.22□□□□□ -2.05
EPHA4P54764 RNU4-58P-201ENST00000363192 141 ntBASIC2.21□□□□□ -2.06
EPHA4P54764 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
EPHA4P54764 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.21□□□□□ -2.06
EPHA4P54764 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
EPHA4P54764 AL161722.3-201ENST00000605789 2983 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 Y_RNA.316-201ENST00000365118 111 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 RNU6-524P-201ENST00000384270 107 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 MIR1185-1-201ENST00000408598 86 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 SNORD93-201ENST00000408813 74 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 AC019176.1-201ENST00000518519 225 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
EPHA4P54764 RNU6-1296P-201ENST00000383879 107 ntBASIC2.19□□□□□ -2.06
EPHA4P54764 SNORA67.3-201ENST00000384366 140 ntBASIC2.19□□□□□ -2.06
EPHA4P54764 RNU4-83P-201ENST00000410863 133 ntBASIC2.19□□□□□ -2.06
EPHA4P54764 AC245517.4-201ENST00000448601 281 ntBASIC2.19□□□□□ -2.06
EPHA4P54764 Y_RNA.648-201ENST00000459455 110 ntBASIC2.19□□□□□ -2.06
EPHA4P54764 AP003716.2-201ENST00000528260 108 ntBASIC2.19□□□□□ -2.06
EPHA4P54764 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.19□□□□□ -2.06
EPHA4P54764 MIR4662A-201ENST00000637499 67 ntBASIC2.19□□□□□ -2.06
EPHA4P54764 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
EPHA4P54764 RNU4-32P-201ENST00000363404 141 ntBASIC2.18□□□□□ -2.06
EPHA4P54764 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
EPHA4P54764 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
EPHA4P54764 SNORD1A-201ENST00000364968 72 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 RNU6-243P-201ENST00000391140 107 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 AC087499.7-201ENST00000441958 109 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 snoU13.25-201ENST00000458945 104 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 SNORD4B-201ENST00000459083 72 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 MIR3664-201ENST00000579074 99 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 AC103810.8-201ENST00000607347 118 ntBASIC2.17□□□□□ -2.06
EPHA4P54764 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
EPHA4P54764 Y_RNA.221-201ENST00000364248 96 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
EPHA4P54764 RNU6-1254P-201ENST00000391266 104 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 snoU13.26-201ENST00000459452 105 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 AC005908.1-201ENST00000468701 347 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 AC023790.1-201ENST00000482174 347 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
EPHA4P54764 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
EPHA4P54764 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
EPHA4P54764 MIR302D-201ENST00000362275 68 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 RNU6-403P-201ENST00000363163 104 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 RNU6-654P-201ENST00000364373 107 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 RNU6-580P-201ENST00000365159 107 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
EPHA4P54764 snoU13.15-201ENST00000459407 104 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 RNU6-65P-201ENST00000516332 98 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 MIR3198-2-201ENST00000577868 80 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 MIR4491-201ENST00000581087 68 ntBASIC2.15□□□□□ -2.07
EPHA4P54764 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.15□□□□□ -2.07
EPHA4P54764 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
EPHA4P54764 MIR101-2-201ENST00000362195 79 ntBASIC2.14□□□□□ -2.07
EPHA4P54764 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
EPHA4P54764 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
EPHA4P54764 MIR1257-201ENST00000408490 117 ntBASIC2.14□□□□□ -2.07
EPHA4P54764 RNA5SP95-201ENST00000410319 137 ntBASIC2.14□□□□□ -2.07
EPHA4P54764 RNU6-531P-201ENST00000516694 104 ntBASIC2.14□□□□□ -2.07
EPHA4P54764 RNU7-10P-201ENST00000607194 63 ntBASIC2.14□□□□□ -2.07
EPHA4P54764 AL627230.6-201ENST00000611129 280 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 907.8 ms