Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
CLCNKAP51800 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
CLCNKAP51800 RMST_2.1-201ENST00000617263 136 ntBASIC0.84□□□□□ -2.27
CLCNKAP51800 MIR539-201ENST00000365690 78 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CLCNKAP51800 Y_RNA.525-201ENST00000384570 113 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 RNU4-69P-201ENST00000410677 143 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 AC096949.1-201ENST00000412047 152 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 RNU7-107P-201ENST00000459121 61 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 RNU6-1234P-201ENST00000516877 103 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 AL359881.1-201ENST00000602916 267 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 AL136317.1-201ENST00000612653 226 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
CLCNKAP51800 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.83□□□□□ -2.28
CLCNKAP51800 SNORD58C-201ENST00000365223 64 ntBASIC0.82□□□□□ -2.28
CLCNKAP51800 MIR125B2-201ENST00000385128 89 ntBASIC0.82□□□□□ -2.28
CLCNKAP51800 SNORD105-201ENST00000386910 85 ntBASIC0.82□□□□□ -2.28
CLCNKAP51800 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
CLCNKAP51800 RNU6-772P-201ENST00000516042 105 ntBASIC0.82□□□□□ -2.28
CLCNKAP51800 SNORD67.1-201ENST00000516618 108 ntBASIC0.82□□□□□ -2.28
CLCNKAP51800 Y_RNA.218-201ENST00000364218 104 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 MIR520H-201ENST00000385126 88 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 MIR938-201ENST00000401216 83 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 AL603908.1-201ENST00000406098 201 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 RNU4-83P-201ENST00000410863 133 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 AC008608.1-201ENST00000603910 127 ntBASIC0.81□□□□□ -2.28
CLCNKAP51800 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CLCNKAP51800 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 Y_RNA.299-201ENST00000364973 94 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 RNU6-364P-201ENST00000384387 107 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 Y_RNA.528-201ENST00000384575 108 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 Y_RNA.588-201ENST00000391254 102 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 SNORD99-201ENST00000408612 74 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 RNU6-735P-201ENST00000410612 107 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 RNA5SP136-201ENST00000410906 107 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 Y_RNA.630-201ENST00000411370 108 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 RNU7-56P-201ENST00000458744 62 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 RNU7-102P-201ENST00000458948 62 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 RNU7-137P-201ENST00000516788 62 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 RNU7-156P-201ENST00000517214 74 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 AC025166.1-201ENST00000612411 163 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.8□□□□□ -2.28
CLCNKAP51800 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CLCNKAP51800 RNU6-403P-201ENST00000363163 104 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 MIRLET7F2-201ENST00000385277 83 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 SNORD77B-201ENST00000391112 67 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 TMSB4XP3-201ENST00000445144 114 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 RNU7-6P-201ENST00000516845 62 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 MIR4491-201ENST00000581087 68 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 AC025627.3-201ENST00000582078 182 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 MIR8066-201ENST00000617280 78 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 AC105081.1-201ENST00000617727 106 ntBASIC0.79□□□□□ -2.28
CLCNKAP51800 Y_RNA.71-201ENST00000362892 104 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 Y_RNA.198-201ENST00000364013 98 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 Y_RNA.213-201ENST00000364178 111 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 RNU6-616P-201ENST00000384353 107 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 SNORA72.6-201ENST00000384520 129 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 RNU1-119P-201ENST00000391122 165 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 MIR548J-201ENST00000408833 112 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 COX6CP6-201ENST00000490840 228 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 MIR151B-201ENST00000584249 96 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 SNORD92-201ENST00000585078 85 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
CLCNKAP51800 Y_RNA.13-201ENST00000362403 112 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-80P-201ENST00000384195 107 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-447P-201ENST00000410293 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-1118P-201ENST00000410382 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-1076P-201ENST00000410397 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-355P-201ENST00000410427 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-791P-201ENST00000410467 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-705P-201ENST00000410601 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-1100P-201ENST00000410691 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-860P-201ENST00000410860 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-1217P-201ENST00000411276 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNU6-785P-201ENST00000411324 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 RNA5SP220-201ENST00000516298 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 SNORA25.16-201ENST00000516741 121 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 MIR3163-201ENST00000581592 73 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 AL078603.1-201ENST00000603824 313 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 U6.90-201ENST00000614007 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 AC087741.2-201ENST00000619415 172 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 U6.70-201ENST00000620287 104 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 MTND5P18-201ENST00000445624 1801 ntBASIC0.77□□□□□ -2.29
CLCNKAP51800 AL157777.2-201ENST00000258070 137 ntBASIC0.76□□□□□ -2.29
CLCNKAP51800 Y_RNA.42-201ENST00000362660 108 ntBASIC0.76□□□□□ -2.29
CLCNKAP51800 MIR206-201ENST00000384872 86 ntBASIC0.76□□□□□ -2.29
CLCNKAP51800 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CLCNKAP51800 RNU6-1307P-201ENST00000391012 103 ntBASIC0.76□□□□□ -2.29
CLCNKAP51800 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
CLCNKAP51800 RNU6-1223P-201ENST00000517124 104 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms