Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SNORD115-2-201ENST00000362842 82 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU4-58P-201ENST00000363192 141 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORA63.5-201ENST00000363548 123 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORA25.7-201ENST00000364375 127 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU6-923P-201ENST00000364753 107 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORD115-20-201ENST00000365099 82 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 MIR606-201ENST00000384851 96 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 MIR760-201ENST00000390220 80 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU6-127P-201ENST00000390897 107 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU7-113P-201ENST00000459273 62 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNA5SP236-201ENST00000516169 116 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 DEFB131E-201ENST00000532329 154 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 U6.109-201ENST00000636749 87 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 RNU6-275P-201ENST00000364910 107 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 MTND2P23-201ENST00000422990 651 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 RNU7-129P-201ENST00000516128 62 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 MIR4752-201ENST00000579672 72 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.04□□□□□ -2.42
SHMT2P34897 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 SNORA32-201ENST00000384072 121 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 SNORD58.1-201ENST00000391313 66 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 AL022718.1-201ENST00000412004 84 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 RNA5SP33-201ENST00000516687 98 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 RNU7-137P-201ENST00000516788 62 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 AC138749.4-201ENST00000563970 127 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.05□□□□□ -2.42
SHMT2P34897 SNORD27-201ENST00000363981 72 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 RNU6-756P-201ENST00000383997 107 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 RNU4-70P-201ENST00000384579 139 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 MIR5190-201ENST00000581537 80 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 AC008737.2-201ENST00000599446 118 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 AL359881.1-201ENST00000602916 267 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 AC098479.1-201ENST00000609225 154 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 RNU6-702P-201ENST00000364982 107 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 AC108059.2-201ENST00000434626 151 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 AC244505.6-201ENST00000452829 130 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 SNORD67.1-201ENST00000516618 108 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 MIR548AE2-201ENST00000583456 67 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 U6.106-201ENST00000636360 105 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 MIR101-2-201ENST00000362195 79 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 RNU6-161P-201ENST00000363051 106 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 MIR643-201ENST00000385267 97 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 SNORD115-24-201ENST00000363528 82 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNA5SP457-201ENST00000363657 124 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNU6-726P-201ENST00000364680 107 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNU6-738P-201ENST00000384531 106 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 MIR145-201ENST00000384967 88 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SHMT2P34897 RPL39P34-201ENST00000477141 156 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNU2-35P-201ENST00000516446 142 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 AL109933.3-201ENST00000619095 188 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 SNORD114-10-201ENST00000363409 72 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 SNORA63-201ENST00000363450 132 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNY1P2-201ENST00000364820 117 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNU6-690P-201ENST00000365242 106 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNU6-768P-201ENST00000384683 107 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 MIR1270-201ENST00000459320 83 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 MIR4305-201ENST00000583252 102 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 AL360085.1-201ENST00000604713 532 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 MIR2909-201ENST00000617113 69 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 AL162376.1-201ENST00000624117 175 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNA5SP325-201ENST00000363756 130 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 MIR593-201ENST00000384856 100 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms