Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SNORA2B-201ENST00000384583 137 ntBASIC0.86□□□□□ -2.27
SHC1P29353 RNU6-476P-201ENST00000384726 107 ntBASIC0.86□□□□□ -2.27
SHC1P29353 MIR548D2-201ENST00000384955 97 ntBASIC0.86□□□□□ -2.27
SHC1P29353 MIR759-201ENST00000390224 91 ntBASIC0.86□□□□□ -2.27
SHC1P29353 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.86□□□□□ -2.27
SHC1P29353 Y_RNA.629-201ENST00000411368 105 ntBASIC0.86□□□□□ -2.27
SHC1P29353 AC002429.1-201ENST00000437672 148 ntBASIC0.86□□□□□ -2.27
SHC1P29353 RNU7-62P-201ENST00000458856 62 ntBASIC0.86□□□□□ -2.27
SHC1P29353 AC141846.1-201ENST00000568348 142 ntBASIC0.86□□□□□ -2.27
SHC1P29353 MIR3163-201ENST00000581592 73 ntBASIC0.86□□□□□ -2.27
SHC1P29353 MIR4452-201ENST00000583004 71 ntBASIC0.86□□□□□ -2.27
SHC1P29353 AL662814.1-201ENST00000617364 121 ntBASIC0.86□□□□□ -2.27
SHC1P29353 AC012676.2-201ENST00000619258 186 ntBASIC0.86□□□□□ -2.27
SHC1P29353 MIR377-201ENST00000362145 69 ntBASIC0.85□□□□□ -2.27
SHC1P29353 RNU6-834P-201ENST00000362367 110 ntBASIC0.85□□□□□ -2.27
SHC1P29353 Y_RNA.35-201ENST00000362601 101 ntBASIC0.85□□□□□ -2.27
SHC1P29353 RNY4P6-201ENST00000363667 96 ntBASIC0.85□□□□□ -2.27
SHC1P29353 SNORD113.3-201ENST00000364630 78 ntBASIC0.85□□□□□ -2.27
SHC1P29353 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
SHC1P29353 RNU6-1325P-201ENST00000364905 105 ntBASIC0.85□□□□□ -2.27
SHC1P29353 RNU6-1056P-201ENST00000383996 107 ntBASIC0.85□□□□□ -2.27
SHC1P29353 RNU6-616P-201ENST00000384353 107 ntBASIC0.85□□□□□ -2.27
SHC1P29353 SNORD116-21-201ENST00000384507 92 ntBASIC0.85□□□□□ -2.27
SHC1P29353 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
SHC1P29353 RNU6-1086P-201ENST00000410930 100 ntBASIC0.85□□□□□ -2.27
SHC1P29353 SNORD67.1-201ENST00000516618 108 ntBASIC0.85□□□□□ -2.27
SHC1P29353 AL035470.1-201ENST00000622571 220 ntBASIC0.85□□□□□ -2.27
SHC1P29353 MIR1255B1-201ENST00000636325 63 ntBASIC0.85□□□□□ -2.27
SHC1P29353 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.85□□□□□ -2.27
SHC1P29353 Y_RNA.168-201ENST00000363740 102 ntBASIC0.84□□□□□ -2.27
SHC1P29353 Y_RNA.362-201ENST00000365518 110 ntBASIC0.84□□□□□ -2.27
SHC1P29353 RNU6-1165P-201ENST00000410119 107 ntBASIC0.84□□□□□ -2.27
SHC1P29353 RNA5SP237-201ENST00000410414 113 ntBASIC0.84□□□□□ -2.27
SHC1P29353 AC096949.1-201ENST00000412047 152 ntBASIC0.84□□□□□ -2.27
SHC1P29353 AC015818.7-201ENST00000428754 109 ntBASIC0.84□□□□□ -2.27
SHC1P29353 AC087499.7-201ENST00000441958 109 ntBASIC0.84□□□□□ -2.27
SHC1P29353 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
SHC1P29353 MIR4679-2-201ENST00000578358 77 ntBASIC0.84□□□□□ -2.27
SHC1P29353 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.84□□□□□ -2.27
SHC1P29353 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.84□□□□□ -2.27
SHC1P29353 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
SHC1P29353 SNORD115-19-201ENST00000363098 82 ntBASIC0.83□□□□□ -2.28
SHC1P29353 SNORD115-18-201ENST00000363293 82 ntBASIC0.83□□□□□ -2.28
SHC1P29353 Y_RNA.224-201ENST00000364308 111 ntBASIC0.83□□□□□ -2.28
SHC1P29353 SNORD115-17-201ENST00000364612 82 ntBASIC0.83□□□□□ -2.28
SHC1P29353 RNU6-215P-201ENST00000365169 102 ntBASIC0.83□□□□□ -2.28
SHC1P29353 U8.15-201ENST00000390947 134 ntBASIC0.83□□□□□ -2.28
SHC1P29353 RNU6-1307P-201ENST00000391012 103 ntBASIC0.83□□□□□ -2.28
SHC1P29353 SNORD111-201ENST00000408139 94 ntBASIC0.83□□□□□ -2.28
SHC1P29353 SNORD83.1-201ENST00000411362 77 ntBASIC0.83□□□□□ -2.28
SHC1P29353 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SHC1P29353 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
SHC1P29353 RNU6-589P-201ENST00000516485 107 ntBASIC0.83□□□□□ -2.28
SHC1P29353 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
SHC1P29353 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
SHC1P29353 RNU6-94P-201ENST00000607728 107 ntBASIC0.83□□□□□ -2.28
SHC1P29353 AC105081.1-201ENST00000617727 106 ntBASIC0.83□□□□□ -2.28
SHC1P29353 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
SHC1P29353 SNORA63.5-201ENST00000363548 123 ntBASIC0.82□□□□□ -2.28
SHC1P29353 Y_RNA.281-201ENST00000364774 94 ntBASIC0.82□□□□□ -2.28
SHC1P29353 RNU6-934P-201ENST00000365154 107 ntBASIC0.82□□□□□ -2.28
SHC1P29353 RNU6-949P-201ENST00000384040 107 ntBASIC0.82□□□□□ -2.28
SHC1P29353 RNY4P18-201ENST00000391107 89 ntBASIC0.82□□□□□ -2.28
SHC1P29353 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.82□□□□□ -2.28
SHC1P29353 RNU7-137P-201ENST00000516788 62 ntBASIC0.82□□□□□ -2.28
SHC1P29353 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
SHC1P29353 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SHC1P29353 RNU6-369P-201ENST00000362515 102 ntBASIC0.81□□□□□ -2.28
SHC1P29353 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
SHC1P29353 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
SHC1P29353 MIR206-201ENST00000384872 86 ntBASIC0.81□□□□□ -2.28
SHC1P29353 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
SHC1P29353 SNORD12-201ENST00000391002 90 ntBASIC0.81□□□□□ -2.28
SHC1P29353 SNORD77B-201ENST00000391112 67 ntBASIC0.81□□□□□ -2.28
SHC1P29353 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.81□□□□□ -2.28
SHC1P29353 AC063976.4-201ENST00000421971 163 ntBASIC0.81□□□□□ -2.28
SHC1P29353 RPL39P34-201ENST00000477141 156 ntBASIC0.81□□□□□ -2.28
SHC1P29353 Y_RNA.709-201ENST00000516952 92 ntBASIC0.81□□□□□ -2.28
SHC1P29353 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.81□□□□□ -2.28
SHC1P29353 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.81□□□□□ -2.28
SHC1P29353 RNU6-363P-201ENST00000362895 105 ntBASIC0.8□□□□□ -2.28
SHC1P29353 Y_RNA.85-201ENST00000363014 111 ntBASIC0.8□□□□□ -2.28
SHC1P29353 Y_RNA.116-201ENST00000363292 103 ntBASIC0.8□□□□□ -2.28
SHC1P29353 SNORD114-10-201ENST00000363409 72 ntBASIC0.8□□□□□ -2.28
SHC1P29353 SNORD115-35-201ENST00000365122 82 ntBASIC0.8□□□□□ -2.28
SHC1P29353 RNU6-880P-201ENST00000384526 107 ntBASIC0.8□□□□□ -2.28
SHC1P29353 RNU6-1321P-201ENST00000390905 107 ntBASIC0.8□□□□□ -2.28
SHC1P29353 AL353813.1-201ENST00000440700 253 ntBASIC0.8□□□□□ -2.28
SHC1P29353 MIR18B-201ENST00000454574 71 ntBASIC0.8□□□□□ -2.28
SHC1P29353 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.8□□□□□ -2.28
SHC1P29353 RNU6-521P-201ENST00000516663 105 ntBASIC0.8□□□□□ -2.28
SHC1P29353 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
SHC1P29353 SNORA4-201ENST00000584302 138 ntBASIC0.8□□□□□ -2.28
SHC1P29353 AC020891.4-201ENST00000605745 93 ntBASIC0.8□□□□□ -2.28
SHC1P29353 AC023934.1-201ENST00000574529 2389 ntBASIC0.79□□□□□ -2.28
SHC1P29353 RNU6-1107P-201ENST00000364817 104 ntBASIC0.79□□□□□ -2.28
SHC1P29353 RNU6-44P-201ENST00000384045 107 ntBASIC0.79□□□□□ -2.28
SHC1P29353 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
SHC1P29353 RNU6-679P-201ENST00000391003 106 ntBASIC0.79□□□□□ -2.28
SHC1P29353 SNORA7.5-201ENST00000410672 110 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms