Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU6-1168P-201ENST00000390831 104 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 U8.15-201ENST00000390947 134 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 SNORD93-201ENST00000408813 74 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.85□□□□□ -2.27
HLA-DOBP13765 RNU6-977P-201ENST00000516411 103 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 SNORD67.1-201ENST00000516618 108 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 RNU7-137P-201ENST00000516788 62 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.85□□□□□ -2.27
HLA-DOBP13765 AC020891.4-201ENST00000605745 93 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 AC103810.9-201ENST00000606688 112 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 AC087741.2-201ENST00000619415 172 ntBASIC0.85□□□□□ -2.27
HLA-DOBP13765 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HLA-DOBP13765 Y_RNA.261-201ENST00000364631 102 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-447P-201ENST00000410293 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-1118P-201ENST00000410382 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-1076P-201ENST00000410397 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-355P-201ENST00000410427 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-791P-201ENST00000410467 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-705P-201ENST00000410601 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-1100P-201ENST00000410691 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-860P-201ENST00000410860 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-1217P-201ENST00000411276 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNU6-785P-201ENST00000411324 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 PDCD5P2-201ENST00000507570 312 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 AC025627.3-201ENST00000582078 182 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 U6.90-201ENST00000614007 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 U6.70-201ENST00000620287 104 ntBASIC0.84□□□□□ -2.27
HLA-DOBP13765 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
HLA-DOBP13765 MIR938-201ENST00000401216 83 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 RNU6-735P-201ENST00000410612 107 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 AL606753.1-201ENST00000427435 87 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 AC015818.7-201ENST00000428754 109 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 AC087499.7-201ENST00000441958 109 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 Y_RNA.649-201ENST00000459077 103 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 RNU6-1053P-201ENST00000515930 101 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 SNORD33.1-201ENST00000516213 88 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 RNU6-313P-201ENST00000516317 112 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 MIR4804-201ENST00000581683 73 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 AL359881.1-201ENST00000602916 267 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 AL670379.3-201ENST00000605040 251 ntBASIC0.83□□□□□ -2.28
HLA-DOBP13765 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
HLA-DOBP13765 RNA5SP205-201ENST00000364653 136 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 Y_RNA.353-201ENST00000365440 108 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 RNU6-616P-201ENST00000384353 107 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 SNORA19-201ENST00000384737 128 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 MIR548A3-201ENST00000385297 97 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 RNU6-1154P-201ENST00000391001 104 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 RNU2-51P-201ENST00000410708 197 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 AC096949.1-201ENST00000412047 152 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 AC133485.1-201ENST00000567176 124 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 SNORD92-201ENST00000585078 85 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 AL589743.1-201ENST00000551932 2712 ntBASIC0.82□□□□□ -2.28
HLA-DOBP13765 RNU6-364P-201ENST00000384387 107 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 MIR520F-201ENST00000384824 87 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 MIR206-201ENST00000384872 86 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 SNORD105-201ENST00000386910 85 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 RNU4-83P-201ENST00000410863 133 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 UBL5P1-201ENST00000507979 193 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 RNU7-2P-201ENST00000516096 62 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 RNU7-156P-201ENST00000517214 74 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 MIR4679-2-201ENST00000578358 77 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
HLA-DOBP13765 RMST_2.1-201ENST00000617263 136 ntBASIC0.81□□□□□ -2.28
HLA-DOBP13765 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
HLA-DOBP13765 RNU6-834P-201ENST00000362367 110 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 RNU6-1081P-201ENST00000384537 107 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 RNU1-119P-201ENST00000391122 165 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 Y_RNA.588-201ENST00000391254 102 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 RNU7-56P-201ENST00000458744 62 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 MIR4491-201ENST00000581087 68 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 Y_RNA.773-201ENST00000607168 90 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 U2.22-201ENST00000636441 106 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 MIR6767-201ENST00000637302 66 ntBASIC0.8□□□□□ -2.28
HLA-DOBP13765 MIR96-201ENST00000362288 78 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 RNU6-403P-201ENST00000363163 104 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 RNY1P2-201ENST00000364820 117 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 SNORD115-35-201ENST00000365122 82 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 Y_RNA.362-201ENST00000365518 110 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
HLA-DOBP13765 RNU6-765P-201ENST00000516916 99 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 AC007012.1-201ENST00000567192 175 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 AC105081.1-201ENST00000617727 106 ntBASIC0.79□□□□□ -2.28
HLA-DOBP13765 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
HLA-DOBP13765 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HLA-DOBP13765 Y_RNA.98-201ENST00000363109 102 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 Y_RNA.344-201ENST00000365381 112 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
HLA-DOBP13765 Y_RNA.448-201ENST00000384185 108 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 RNU6-1321P-201ENST00000390905 107 ntBASIC0.78□□□□□ -2.28
HLA-DOBP13765 RNU7-48P-201ENST00000458875 63 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms