Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.31□□□□□ -2.04
USP17L3A6NCW0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.31□□□□□ -2.04
USP17L3A6NCW0 HMGN2P19-201ENST00000425149 265 ntBASIC2.31□□□□□ -2.04
USP17L3A6NCW0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.31□□□□□ -2.04
USP17L3A6NCW0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.31□□□□□ -2.04
USP17L3A6NCW0 MTND5P40-201ENST00000559945 246 ntBASIC2.31□□□□□ -2.04
USP17L3A6NCW0 RNU6-86P-201ENST00000606534 107 ntBASIC2.31□□□□□ -2.04
USP17L3A6NCW0 RNY1P2-201ENST00000364820 117 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 Y_RNA.567-201ENST00000384736 106 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 MIR1185-1-201ENST00000408598 86 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 Y_RNA.593-201ENST00000410292 98 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 AC103810.7-201ENST00000607821 91 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 MIR6516-201ENST00000630554 81 ntBASIC2.3□□□□□ -2.04
USP17L3A6NCW0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USP17L3A6NCW0 RNU6-1244P-201ENST00000363614 108 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 Y_RNA.168-201ENST00000363740 102 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 RNA5SP190-201ENST00000365222 118 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 MT-TF-201ENST00000387314 71 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 RNU6-613P-201ENST00000410412 108 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 RPS29P11-201ENST00000496507 171 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 SEPT14P17-201ENST00000617978 177 ntBASIC2.29□□□□□ -2.04
USP17L3A6NCW0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
USP17L3A6NCW0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
USP17L3A6NCW0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
USP17L3A6NCW0 MIR494-201ENST00000349529 81 ntBASIC2.28□□□□□ -2.04
USP17L3A6NCW0 SNORD58A-201ENST00000383875 65 ntBASIC2.28□□□□□ -2.04
USP17L3A6NCW0 SNORA25.15-201ENST00000516487 89 ntBASIC2.28□□□□□ -2.04
USP17L3A6NCW0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.28□□□□□ -2.04
USP17L3A6NCW0 AC012676.2-201ENST00000619258 186 ntBASIC2.28□□□□□ -2.04
USP17L3A6NCW0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.28□□□□□ -2.04
USP17L3A6NCW0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP17L3A6NCW0 MIR30D-201ENST00000362283 70 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 SNORD116-22-201ENST00000384430 92 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 MIR9-3-201ENST00000385084 90 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 SNORD13-201ENST00000459299 104 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 AC025033.1-201ENST00000463883 194 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 MIR3664-201ENST00000579074 99 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 AC084768.2-201ENST00000622736 221 ntBASIC2.27□□□□□ -2.05
USP17L3A6NCW0 HSBP1P2-201ENST00000299671 229 ntBASIC2.26□□□□□ -2.05
USP17L3A6NCW0 Y_RNA.190-201ENST00000363964 101 ntBASIC2.26□□□□□ -2.05
USP17L3A6NCW0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USP17L3A6NCW0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP17L3A6NCW0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP17L3A6NCW0 Y_RNA.173-201ENST00000363776 113 ntBASIC2.25□□□□□ -2.05
USP17L3A6NCW0 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
USP17L3A6NCW0 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
USP17L3A6NCW0 MIR5694-201ENST00000581190 76 ntBASIC2.25□□□□□ -2.05
USP17L3A6NCW0 snoU13.31-201ENST00000607291 104 ntBASIC2.25□□□□□ -2.05
USP17L3A6NCW0 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
USP17L3A6NCW0 IGLL4P-201ENST00000614590 133 ntBASIC2.25□□□□□ -2.05
USP17L3A6NCW0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP17L3A6NCW0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USP17L3A6NCW0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
USP17L3A6NCW0 MIR378A-201ENST00000362177 66 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 RNY1P1-201ENST00000364372 112 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 MIR676-201ENST00000390702 67 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 AL512310.8-201ENST00000550183 120 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 AC138749.4-201ENST00000563970 127 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 AL096840.1-201ENST00000603287 93 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 MIR8081-201ENST00000611533 95 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 U6.109-201ENST00000636749 87 ntBASIC2.24□□□□□ -2.05
USP17L3A6NCW0 RNU6-1125P-201ENST00000363601 107 ntBASIC2.23□□□□□ -2.05
USP17L3A6NCW0 RNU6-480P-201ENST00000384332 107 ntBASIC2.23□□□□□ -2.05
USP17L3A6NCW0 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
USP17L3A6NCW0 AC121758.2-201ENST00000553271 193 ntBASIC2.23□□□□□ -2.05
USP17L3A6NCW0 AC024614.2-201ENST00000577584 372 ntBASIC2.23□□□□□ -2.05
USP17L3A6NCW0 AC090897.1-201ENST00000580909 226 ntBASIC2.23□□□□□ -2.05
USP17L3A6NCW0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USP17L3A6NCW0 RNY1P10-201ENST00000363268 113 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 RNU6-654P-201ENST00000364373 107 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 RNA5SP173-201ENST00000364857 136 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
USP17L3A6NCW0 AC008834.1-201ENST00000511612 175 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 RNU6-165P-201ENST00000517170 99 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.22□□□□□ -2.05
USP17L3A6NCW0 MIR4422-201ENST00000581938 83 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 MIR4781-201ENST00000585250 76 ntBASIC2.22□□□□□ -2.05
USP17L3A6NCW0 RNA5SP133-201ENST00000363368 119 ntBASIC2.21□□□□□ -2.06
USP17L3A6NCW0 RNU6-1152P-201ENST00000384576 107 ntBASIC2.21□□□□□ -2.06
USP17L3A6NCW0 AC245517.4-201ENST00000448601 281 ntBASIC2.21□□□□□ -2.06
USP17L3A6NCW0 RNU1-98P-201ENST00000458992 160 ntBASIC2.21□□□□□ -2.06
USP17L3A6NCW0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.21□□□□□ -2.06
USP17L3A6NCW0 AL161722.3-201ENST00000605789 2983 ntBASIC2.21□□□□□ -2.06
USP17L3A6NCW0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
USP17L3A6NCW0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP17L3A6NCW0 RNU6-675P-201ENST00000384236 104 ntBASIC2.2□□□□□ -2.06
USP17L3A6NCW0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USP17L3A6NCW0 RNA5SP95-201ENST00000410319 137 ntBASIC2.2□□□□□ -2.06
USP17L3A6NCW0 RNU6-402P-201ENST00000410678 103 ntBASIC2.2□□□□□ -2.06
USP17L3A6NCW0 MIR18B-201ENST00000454574 71 ntBASIC2.2□□□□□ -2.06
USP17L3A6NCW0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP17L3A6NCW0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
USP17L3A6NCW0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USP17L3A6NCW0 Y_RNA.226-201ENST00000364337 114 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms