Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 RNU6-823P-201ENST00000391042 103 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 MIR1252-201ENST00000408861 65 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 RNA5SP144-201ENST00000410846 116 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 AC096531.1-201ENST00000419107 107 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 MTND4P19-201ENST00000446659 478 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 RNU6-570P-201ENST00000517051 105 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 MIR4263-201ENST00000584745 83 ntBASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.51□□□□□ -2.49
VCX3AQ9NNX9 RNU6-509P-201ENST00000363519 107 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 SNORA32-201ENST00000384072 121 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 MIR599-201ENST00000385069 95 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 SNORA79-201ENST00000408376 140 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 RNU7-113P-201ENST00000459273 62 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 RNU6-561P-201ENST00000516222 102 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 SNORD67.1-201ENST00000516618 108 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 SNORA40.15-201ENST00000516884 107 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 AL359881.1-201ENST00000602916 267 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 RNU7-10P-201ENST00000607194 63 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.52□□□□□ -2.49
VCX3AQ9NNX9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 RNU6-449P-201ENST00000383914 107 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 RNY1P6-201ENST00000384193 109 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 MIR516B1-201ENST00000385211 90 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 AC097635.1-201ENST00000450678 155 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 SERF1AP1-201ENST00000514575 187 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 MIR6507-201ENST00000613630 70 ntBASIC-0.53□□□□□ -2.49
VCX3AQ9NNX9 MIR655-201ENST00000362159 97 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 SNORD115-2-201ENST00000362842 82 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 RNU6-865P-201ENST00000364772 107 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 RNY3P1-201ENST00000365085 102 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 SNORD115-20-201ENST00000365099 82 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 RNU6-429P-201ENST00000384582 108 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 RNU6-381P-201ENST00000391259 108 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 RNU4-43P-201ENST00000410628 137 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 RNA5SP127-201ENST00000411051 133 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 ELOCP20-201ENST00000422460 345 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 TRAJ51-201ENST00000504127 63 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 RNA5SP33-201ENST00000516687 98 ntBASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.54□□□□□ -2.5
VCX3AQ9NNX9 SNORD114-10-201ENST00000363409 72 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 RNU6-978P-201ENST00000364371 103 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 RNA5SP205-201ENST00000364653 136 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 RNU6-806P-201ENST00000365147 105 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 RNU6-728P-201ENST00000365375 104 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 RNU6-101P-201ENST00000410323 104 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 AL022718.1-201ENST00000412004 84 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 RBMX2P4-201ENST00000441256 376 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 SNORD2.1-201ENST00000458762 69 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 AC006504.6-201ENST00000590142 199 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 RN7SL660P-201ENST00000614852 299 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 AC105081.1-201ENST00000617727 106 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.55□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 RNU6-770P-201ENST00000363929 105 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 U8.6-201ENST00000364939 135 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 MIR635-201ENST00000384830 98 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 MIR624-201ENST00000385217 97 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 RNA5SP330-201ENST00000517096 96 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 MIR3920-201ENST00000581751 86 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 MIR548AE2-201ENST00000583456 67 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 AL590491.3-201ENST00000610731 82 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 FTX_2.1-201ENST00000618816 94 ntBASIC-0.56□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 RNY3P15-201ENST00000516297 97 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 SNORD116-25-201ENST00000516517 92 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 MIR4432-201ENST00000581823 84 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 AC090971.5-201ENST00000621102 293 ntBASIC-0.57□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.58□□□□□ -2.5
VCX3AQ9NNX9 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.58□□□□□ -2.5
VCX3AQ9NNX9 MTND5P22-201ENST00000458380 195 ntBASIC-0.58□□□□□ -2.5
VCX3AQ9NNX9 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.58□□□□□ -2.5
VCX3AQ9NNX9 RNU7-188P-201ENST00000517063 64 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms