Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 SNORA25.12-201ENST00000516202 82 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 MIR3678-201ENST00000578455 94 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 MIR4719-201ENST00000585233 84 ntBASIC0.4□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 RNU6-1020P-201ENST00000363684 107 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 RNY1-201ENST00000364228 113 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 MIR644A-201ENST00000385262 94 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 MIR4431-201ENST00000579990 94 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 MIR4491-201ENST00000581087 68 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 MIR6513-201ENST00000621188 64 ntBASIC0.39□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 RNY1P6-201ENST00000384193 109 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 RNA5SP436-201ENST00000516020 115 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 RNU6-1219P-201ENST00000516143 112 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 RNA5SP94-201ENST00000516917 108 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 AC133485.4-201ENST00000561835 220 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 SNORA25.18-201ENST00000607153 114 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
VIPAS39Q9H9C1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 RNY1P13-201ENST00000365030 105 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 RNU6-463P-201ENST00000384340 107 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 MIR598-201ENST00000384868 97 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 AC130289.1-201ENST00000577321 73 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 MIR6082-201ENST00000613604 109 ntBASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.37□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.144-201ENST00000363521 113 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 RNU6-949P-201ENST00000384040 107 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.515-201ENST00000384535 112 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 AC096949.1-201ENST00000412047 152 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 RNU7-113P-201ENST00000459273 62 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 RNU7-79P-201ENST00000516082 62 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 SNORA25.16-201ENST00000516741 121 ntBASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.36□□□□□ -2.35
VIPAS39Q9H9C1 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 RNU6-349P-201ENST00000362402 107 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.274-201ENST00000364714 101 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 SNORA32-201ENST00000384072 121 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 RNA5SP144-201ENST00000410846 116 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 RNU5E-9P-201ENST00000411164 104 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 MTND5P34-201ENST00000568888 325 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 AC009779.6-201ENST00000603972 165 ntBASIC0.35□□□□□ -2.35
VIPAS39Q9H9C1 Y_RNA.233-201ENST00000364407 101 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-818P-201ENST00000364837 108 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-690P-201ENST00000365242 106 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 MIR936-201ENST00000401264 98 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-588P-201ENST00000410281 105 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 AL512326.2-201ENST00000426359 151 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-893P-201ENST00000458841 100 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 AC107027.2-201ENST00000512197 115 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 RNA5SP33-201ENST00000516687 98 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 MIR6844-201ENST00000637122 62 ntBASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
VIPAS39Q9H9C1 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
VIPAS39Q9H9C1 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
VIPAS39Q9H9C1 AL022718.1-201ENST00000412004 84 ntBASIC0.33□□□□□ -2.36
VIPAS39Q9H9C1 RNA5SP236-201ENST00000516169 116 ntBASIC0.33□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-469P-201ENST00000516253 101 ntBASIC0.33□□□□□ -2.36
VIPAS39Q9H9C1 SNORA31.14-201ENST00000516728 116 ntBASIC0.33□□□□□ -2.36
VIPAS39Q9H9C1 DEFB131E-201ENST00000532329 154 ntBASIC0.33□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.435-201ENST00000384095 112 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.489-201ENST00000384410 101 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 MIR489-201ENST00000384923 84 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.793-201ENST00000411222 111 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.32□□□□□ -2.36
VIPAS39Q9H9C1 SNORA36.1-201ENST00000363424 132 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-312P-201ENST00000364629 107 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.297-201ENST00000364950 91 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 SNORA8.2-201ENST00000384372 139 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-535P-201ENST00000384722 107 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 MIR216A-201ENST00000385063 110 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-240P-201ENST00000516098 97 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 uc_338.16-201ENST00000621804 95 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 MIR3658-201ENST00000636291 56 ntBASIC0.31□□□□□ -2.36
VIPAS39Q9H9C1 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-508P-201ENST00000363231 103 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 RNY1P11-201ENST00000363759 113 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 375.9 ms