Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU6-205P-201ENST00000390858 107 ntBASIC1.25□□□□□ -2.21
KRT28Q7Z3Y7 RNA5SP95-201ENST00000410319 137 ntBASIC1.25□□□□□ -2.21
KRT28Q7Z3Y7 AC002429.1-201ENST00000437672 148 ntBASIC1.25□□□□□ -2.21
KRT28Q7Z3Y7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
KRT28Q7Z3Y7 AC010332.2-201ENST00000613083 1904 ntBASIC1.25□□□□□ -2.21
KRT28Q7Z3Y7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-893P-201ENST00000458841 100 ntBASIC1.24□□□□□ -2.21
KRT28Q7Z3Y7 AP001328.1-201ENST00000528550 176 ntBASIC1.24□□□□□ -2.21
KRT28Q7Z3Y7 MIR4264-201ENST00000583520 66 ntBASIC1.24□□□□□ -2.21
KRT28Q7Z3Y7 SNORD113.3-201ENST00000364630 78 ntBASIC1.23□□□□□ -2.21
KRT28Q7Z3Y7 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-257P-201ENST00000410238 98 ntBASIC1.23□□□□□ -2.21
KRT28Q7Z3Y7 MTND4LP9-201ENST00000427694 174 ntBASIC1.23□□□□□ -2.21
KRT28Q7Z3Y7 SUMO1P3-201ENST00000439961 304 ntBASIC1.23□□□□□ -2.21
KRT28Q7Z3Y7 U7.2-201ENST00000607576 63 ntBASIC1.23□□□□□ -2.21
KRT28Q7Z3Y7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 SNORA22.1-201ENST00000362701 134 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 SNORD114-23-201ENST00000363536 72 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 MIR563-201ENST00000385080 79 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 RNA5SP144-201ENST00000410846 116 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 Y_RNA.692-201ENST00000516627 105 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 AC036111.3-201ENST00000526389 112 ntBASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.22□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-774P-201ENST00000363238 107 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 Y_RNA.586-201ENST00000391146 98 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 SNORD111-201ENST00000408139 94 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 RNA5SP272-201ENST00000516095 111 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-240P-201ENST00000516098 97 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 AC108081.1-201ENST00000604358 221 ntBASIC1.21□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-704P-201ENST00000364162 103 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-187P-201ENST00000384139 106 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 MIR548M-201ENST00000408260 86 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-994P-201ENST00000410507 111 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 AL022718.1-201ENST00000412004 84 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 RNU7-62P-201ENST00000458856 62 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-1258P-201ENST00000516911 111 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 AC133485.4-201ENST00000561835 220 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 AC138907.4-201ENST00000570107 226 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 AC010487.4-201ENST00000637027 61 ntBASIC1.2□□□□□ -2.22
KRT28Q7Z3Y7 SNORD115-2-201ENST00000362842 82 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 SNORD115-20-201ENST00000365099 82 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 MIR588-201ENST00000384900 83 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 SNORD12C-201ENST00000386307 89 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 SNORA40-201ENST00000388090 126 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 AL603908.1-201ENST00000406098 201 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 snoU13.2-201ENST00000459201 104 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 TUG1_4.1-201ENST00000619464 181 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 MIR6513-201ENST00000621188 64 ntBASIC1.19□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 Y_RNA.617-201ENST00000410920 90 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 AC004941.2-201ENST00000427009 228 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 AC067940.1-201ENST00000458411 300 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 RNU2-35P-201ENST00000516446 142 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 MIR4305-201ENST00000583252 102 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 AC021443.1-201ENST00000604478 211 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-94P-201ENST00000607728 107 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 MIR6740-201ENST00000618268 113 ntBASIC1.18□□□□□ -2.22
KRT28Q7Z3Y7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 Y_RNA.114-201ENST00000363265 113 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 Y_RNA.366-201ENST00000365540 102 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-716P-201ENST00000365621 103 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 RNA5SP237-201ENST00000410414 113 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 AL158147.1-201ENST00000443970 75 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 IGKV1-22-201ENST00000524313 326 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 FAM71BP1-201ENST00000604431 523 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 MIR8087-201ENST00000612745 78 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 AC012676.2-201ENST00000619258 186 ntBASIC1.17□□□□□ -2.22
KRT28Q7Z3Y7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
KRT28Q7Z3Y7 MIR200A-201ENST00000384875 90 ntBASIC1.16□□□□□ -2.22
KRT28Q7Z3Y7 MIR942-201ENST00000401111 86 ntBASIC1.16□□□□□ -2.22
KRT28Q7Z3Y7 MIR936-201ENST00000401264 98 ntBASIC1.16□□□□□ -2.22
KRT28Q7Z3Y7 RNU7-113P-201ENST00000459273 62 ntBASIC1.16□□□□□ -2.22
KRT28Q7Z3Y7 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
KRT28Q7Z3Y7 RNU6-647P-201ENST00000364243 107 ntBASIC1.15□□□□□ -2.23
KRT28Q7Z3Y7 Y_RNA.294-201ENST00000364916 102 ntBASIC1.15□□□□□ -2.23
KRT28Q7Z3Y7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.15□□□□□ -2.23
KRT28Q7Z3Y7 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
KRT28Q7Z3Y7 AC113410.1-201ENST00000505029 247 ntBASIC1.15□□□□□ -2.23
KRT28Q7Z3Y7 uc_338.6-201ENST00000613544 171 ntBASIC1.15□□□□□ -2.23
KRT28Q7Z3Y7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 Y_RNA.298-201ENST00000364960 107 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 MIRLET7F2-201ENST00000385277 83 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 FABP5P4-201ENST00000437203 171 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 RNU7-164P-201ENST00000459221 62 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 RNU7-123P-201ENST00000515911 60 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 AL137067.1-201ENST00000615933 120 ntBASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRT28Q7Z3Y7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms