Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU4-73P-201ENST00000363164 141 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 AL606845.1-201ENST00000404881 255 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 AL365205.2-201ENST00000594586 68 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 AL162726.3-218ENST00000636401 95 ntBASIC-0.51□□□□□ -2.49
ZNF404Q494X3 UBE2WP1-201ENST00000362030 340 ntBASIC-0.52□□□□□ -2.49
ZNF404Q494X3 RNU4-16P-201ENST00000364737 141 ntBASIC-0.52□□□□□ -2.49
ZNF404Q494X3 SNORD110-201ENST00000408189 75 ntBASIC-0.52□□□□□ -2.49
ZNF404Q494X3 RNU6-121P-201ENST00000410525 99 ntBASIC-0.52□□□□□ -2.49
ZNF404Q494X3 MIR4263-201ENST00000584745 83 ntBASIC-0.52□□□□□ -2.49
ZNF404Q494X3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.52□□□□□ -2.49
ZNF404Q494X3 AC084368.1-201ENST00000620935 65 ntBASIC-0.52□□□□□ -2.49
ZNF404Q494X3 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 MIR196A2-201ENST00000385189 110 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 AC006210.1-201ENST00000424882 111 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 FGF7P4-201ENST00000509595 295 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 MIR548H5-201ENST00000580314 60 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.53□□□□□ -2.49
ZNF404Q494X3 AP001180.6-201ENST00000584918 159 ntBASIC-0.53□□□□□ -2.49
ZNF404Q494X3 MIR655-201ENST00000362159 97 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 RNU6-450P-201ENST00000364654 107 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 SNORA79-201ENST00000408376 140 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 MIR4636-201ENST00000582271 80 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 AC098479.1-201ENST00000609225 154 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 MIR4788-201ENST00000639104 80 ntBASIC-0.54□□□□□ -2.5
ZNF404Q494X3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 RNU6-449P-201ENST00000383914 107 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 RNU6-811P-201ENST00000384069 107 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 MIR616-201ENST00000385293 97 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 RNU6-823P-201ENST00000391042 103 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 MIR1252-201ENST00000408861 65 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 BX276092.1-201ENST00000427368 251 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 RNU6-453P-201ENST00000516819 85 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 SCARNA15-202ENST00000516881 127 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 SNORA40.15-201ENST00000516884 107 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.55□□□□□ -2.5
ZNF404Q494X3 AL356055.1-201ENST00000602528 446 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 RNU7-10P-201ENST00000607194 63 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.55□□□□□ -2.5
ZNF404Q494X3 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 RNY1P2-201ENST00000364820 117 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 RNU6-429P-201ENST00000384582 108 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 AC244250.2-201ENST00000418731 148 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 MTND4P19-201ENST00000446659 478 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 MIR6507-201ENST00000613630 70 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
ZNF404Q494X3 SNORD115-2-201ENST00000362842 82 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 RNU6-865P-201ENST00000364772 107 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 SNORD115-20-201ENST00000365099 82 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 MIR516B1-201ENST00000385211 90 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 RNU6-101P-201ENST00000410323 104 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 RNU7-137P-201ENST00000516788 62 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 MIR4493-201ENST00000584016 73 ntBASIC-0.57□□□□□ -2.5
ZNF404Q494X3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
ZNF404Q494X3 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 RNA5SP205-201ENST00000364653 136 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 RNY3P1-201ENST00000365085 102 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 RNA5SP144-201ENST00000410846 116 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 RNU6-570P-201ENST00000517051 105 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
ZNF404Q494X3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.58□□□□□ -2.5
ZNF404Q494X3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.59□□□□□ -2.5
ZNF404Q494X3 MIR101-1-201ENST00000362265 75 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 SNORD114-10-201ENST00000363409 72 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 MIR599-201ENST00000385069 95 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms