Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC096949.1-201ENST00000412047 152 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 RN7SKP12-201ENST00000516275 143 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 MIR4777-201ENST00000583710 86 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 MIR376B-201ENST00000614515 100 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
SRGAP3O43295 Y_RNA.467-201ENST00000384297 102 ntBASIC1.97□□□□□ -2.09
SRGAP3O43295 AC090844.1-201ENST00000422019 156 ntBASIC1.97□□□□□ -2.09
SRGAP3O43295 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
SRGAP3O43295 AL603825.1-201ENST00000438481 80 ntBASIC1.97□□□□□ -2.09
SRGAP3O43295 RNU6-922P-201ENST00000516753 99 ntBASIC1.97□□□□□ -2.09
SRGAP3O43295 RNU7-35P-201ENST00000517174 62 ntBASIC1.97□□□□□ -2.09
SRGAP3O43295 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.97□□□□□ -2.09
SRGAP3O43295 AC022254.1-201ENST00000567857 235 ntBASIC1.97□□□□□ -2.09
SRGAP3O43295 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.97□□□□□ -2.09
SRGAP3O43295 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.97□□□□□ -2.09
SRGAP3O43295 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
SRGAP3O43295 Y_RNA.96-201ENST00000363092 109 ntBASIC1.96□□□□□ -2.1
SRGAP3O43295 RNA5SP173-201ENST00000364857 136 ntBASIC1.96□□□□□ -2.1
SRGAP3O43295 MIR653-201ENST00000385279 96 ntBASIC1.96□□□□□ -2.1
SRGAP3O43295 RNU6-1307P-201ENST00000391012 103 ntBASIC1.96□□□□□ -2.1
SRGAP3O43295 SNORD67.1-201ENST00000516618 108 ntBASIC1.96□□□□□ -2.1
SRGAP3O43295 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.96□□□□□ -2.1
SRGAP3O43295 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
SRGAP3O43295 Y_RNA.448-201ENST00000384185 108 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 SNORD38B-201ENST00000384690 67 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 BTF3P4-201ENST00000418852 495 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 JTBP1-201ENST00000441314 247 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 RPS29P28-201ENST00000446439 141 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 AC009474.2-201ENST00000451383 136 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 RNU7-79P-201ENST00000516082 62 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 Y_RNA.705-201ENST00000516862 110 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 AC105081.1-201ENST00000617727 106 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 SNORD38B-202ENST00000625943 69 ntBASIC1.95□□□□□ -2.1
SRGAP3O43295 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SRGAP3O43295 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SRGAP3O43295 Y_RNA.140-201ENST00000363474 103 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 Y_RNA.247-201ENST00000364500 92 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 RNU6-865P-201ENST00000364772 107 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SRGAP3O43295 MIR1323-201ENST00000408090 73 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 Y_RNA.593-201ENST00000410292 98 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 UBL5P1-201ENST00000507979 193 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 MIR4303-201ENST00000581299 66 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 BX248123.2-201ENST00000606318 124 ntBASIC1.94□□□□□ -2.1
SRGAP3O43295 Y_RNA.17-201ENST00000362433 111 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 RNA5SP48-201ENST00000363969 126 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 MIR34C-201ENST00000384831 77 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 SNORD41-201ENST00000386967 70 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 RNA5SP237-201ENST00000410414 113 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 RNU6-887P-201ENST00000410660 100 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 AC109327.2-201ENST00000448339 378 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.93□□□□□ -2.1
SRGAP3O43295 RNY1P10-201ENST00000363268 113 ntBASIC1.92□□□□□ -2.1
SRGAP3O43295 RNU6-820P-201ENST00000384273 107 ntBASIC1.92□□□□□ -2.1
SRGAP3O43295 SNORA67.5-201ENST00000391036 107 ntBASIC1.92□□□□□ -2.1
SRGAP3O43295 AC027119.1-201ENST00000440877 241 ntBASIC1.92□□□□□ -2.1
SRGAP3O43295 RNA5SP445-201ENST00000515889 115 ntBASIC1.92□□□□□ -2.1
SRGAP3O43295 RNU7-137P-201ENST00000516788 62 ntBASIC1.92□□□□□ -2.1
SRGAP3O43295 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.92□□□□□ -2.1
SRGAP3O43295 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
SRGAP3O43295 AL645939.4-201ENST00000604495 135 ntBASIC1.92□□□□□ -2.1
SRGAP3O43295 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.92□□□□□ -2.1
SRGAP3O43295 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
SRGAP3O43295 RNU6-573P-201ENST00000383938 106 ntBASIC1.91□□□□□ -2.1
SRGAP3O43295 RNU6-1321P-201ENST00000390905 107 ntBASIC1.91□□□□□ -2.1
SRGAP3O43295 RNU6-592P-201ENST00000411333 103 ntBASIC1.91□□□□□ -2.1
SRGAP3O43295 RNA5SP458-201ENST00000516188 119 ntBASIC1.91□□□□□ -2.1
SRGAP3O43295 SNORD53B-201ENST00000577887 78 ntBASIC1.91□□□□□ -2.1
SRGAP3O43295 SNORD38.1-201ENST00000363863 68 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 Y_RNA.190-201ENST00000363964 101 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 RNU1-42P-201ENST00000364033 160 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 RNU6-972P-201ENST00000391208 107 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 RNU6-1006P-201ENST00000516998 103 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 MIR3192-201ENST00000584920 77 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SRGAP3O43295 MIR1245B-201ENST00000636115 69 ntBASIC1.9□□□□□ -2.11
SRGAP3O43295 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SRGAP3O43295 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SRGAP3O43295 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SRGAP3O43295 SNORA25.3-201ENST00000363205 127 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 SNORD114-10-201ENST00000363409 72 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 RNY1P1-201ENST00000364372 112 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 RNU6-813P-201ENST00000384691 107 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SRGAP3O43295 AC108667.1-201ENST00000428618 249 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 RNU6-947P-201ENST00000516264 106 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.89□□□□□ -2.11
SRGAP3O43295 MIR4439-201ENST00000583746 80 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 AL357312.1-201ENST00000603879 298 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 RNU6-86P-201ENST00000606534 107 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 AL096861.1-201ENST00000610899 123 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 AL773524.1-201ENST00000614065 229 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms