Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNA5SP300-201ENST00000391197 107 ntBASIC-0.62□□□□□ -2.51
LSM1O15116 RPL21P38-201ENST00000418090 167 ntBASIC-0.62□□□□□ -2.51
LSM1O15116 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.62□□□□□ -2.51
LSM1O15116 U6.109-201ENST00000636749 87 ntBASIC-0.62□□□□□ -2.51
LSM1O15116 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.63□□□□□ -2.51
LSM1O15116 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.63□□□□□ -2.51
LSM1O15116 MIR548L-201ENST00000408303 86 ntBASIC-0.63□□□□□ -2.51
LSM1O15116 HMGN2P22-201ENST00000427588 175 ntBASIC-0.63□□□□□ -2.51
LSM1O15116 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.63□□□□□ -2.51
LSM1O15116 MIR101-2-201ENST00000362195 79 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.64□□□□□ -2.51
LSM1O15116 RNU7-104P-201ENST00000459398 79 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.64□□□□□ -2.51
LSM1O15116 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.64□□□□□ -2.51
LSM1O15116 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 RNU6-450P-201ENST00000364654 107 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 RNU4-43P-201ENST00000410628 137 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 ELOCP20-201ENST00000422460 345 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 SNORD2.1-201ENST00000458762 69 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 SERF1AP1-201ENST00000514575 187 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.65□□□□□ -2.51
LSM1O15116 SNORD115-2-201ENST00000362842 82 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 SNORD114-28-201ENST00000363610 72 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 RNY1P2-201ENST00000364820 117 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 SNORD115-20-201ENST00000365099 82 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 RNU6-561P-201ENST00000516222 102 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 RNU7-137P-201ENST00000516788 62 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 AC098479.1-201ENST00000609225 154 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 AC090971.5-201ENST00000621102 293 ntBASIC-0.66□□□□□ -2.52
LSM1O15116 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 RNU6-770P-201ENST00000363929 105 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 RNU4-16P-201ENST00000364737 141 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 RNY3P1-201ENST00000365085 102 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 RNA5SP144-201ENST00000410846 116 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 RNU6-875P-201ENST00000516488 106 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 RNU7-70P-201ENST00000516941 66 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 MIR8064-201ENST00000612863 90 ntBASIC-0.67□□□□□ -2.52
LSM1O15116 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.68□□□□□ -2.52
LSM1O15116 SNORD49B-201ENST00000365172 72 ntBASIC-0.68□□□□□ -2.52
LSM1O15116 SNORD14C-201ENST00000365382 88 ntBASIC-0.68□□□□□ -2.52
LSM1O15116 RNU6-449P-201ENST00000383914 107 ntBASIC-0.68□□□□□ -2.52
LSM1O15116 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.68□□□□□ -2.52
LSM1O15116 MIR548H5-201ENST00000580314 60 ntBASIC-0.68□□□□□ -2.52
LSM1O15116 RNU6-978P-201ENST00000364371 103 ntBASIC-0.69□□□□□ -2.52
LSM1O15116 RNU6-806P-201ENST00000365147 105 ntBASIC-0.69□□□□□ -2.52
LSM1O15116 SNORD42.2-201ENST00000365570 69 ntBASIC-0.69□□□□□ -2.52
LSM1O15116 RNU6-381P-201ENST00000391259 108 ntBASIC-0.69□□□□□ -2.52
LSM1O15116 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.69□□□□□ -2.52
LSM1O15116 MIR655-201ENST00000362159 97 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 SNORA32.3-201ENST00000384772 121 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 SNORD110-201ENST00000408189 75 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 AC082651.2-201ENST00000496833 166 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 SNORA40.15-201ENST00000516884 107 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 RNU6-570P-201ENST00000517051 105 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.7□□□□□ -2.52
LSM1O15116 AL359881.1-201ENST00000602916 267 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.7□□□□□ -2.52
LSM1O15116 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 RNU6-865P-201ENST00000364772 107 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 RNU6-429P-201ENST00000384582 108 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 MIR624-201ENST00000385217 97 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 RNU6-101P-201ENST00000410323 104 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 SNORA25.13-201ENST00000516395 103 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 AL356055.1-201ENST00000602528 446 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.71□□□□□ -2.52
LSM1O15116 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 AC139792.2-201ENST00000624218 587 ntBASIC-0.71□□□□□ -2.52
LSM1O15116 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 SNORD114-10-201ENST00000363409 72 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 RNU6-728P-201ENST00000365375 104 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 AC006210.1-201ENST00000424882 111 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 BX276092.1-201ENST00000427368 251 ntBASIC-0.72□□□□□ -2.52
LSM1O15116 RNA5SP484-201ENST00000458857 111 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms