Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-219P-201ENST00000364728 107 ntBASIC2.3□□□□□ -2.04
SOX1O00570 RNU6-497P-201ENST00000365316 104 ntBASIC2.3□□□□□ -2.04
SOX1O00570 RPL31P63-201ENST00000422565 375 ntBASIC2.3□□□□□ -2.04
SOX1O00570 RNU7-137P-201ENST00000516788 62 ntBASIC2.3□□□□□ -2.04
SOX1O00570 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.3□□□□□ -2.04
SOX1O00570 MIR4668-201ENST00000582284 70 ntBASIC2.3□□□□□ -2.04
SOX1O00570 AC103810.7-201ENST00000607821 91 ntBASIC2.3□□□□□ -2.04
SOX1O00570 FO624990.1-201ENST00000636373 85 ntBASIC2.3□□□□□ -2.04
SOX1O00570 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
SOX1O00570 RNU6-979P-201ENST00000383896 107 ntBASIC2.29□□□□□ -2.04
SOX1O00570 SNORD38.2-201ENST00000384470 69 ntBASIC2.29□□□□□ -2.04
SOX1O00570 Y_RNA.567-201ENST00000384736 106 ntBASIC2.29□□□□□ -2.04
SOX1O00570 RNU6-1237P-201ENST00000384777 107 ntBASIC2.29□□□□□ -2.04
SOX1O00570 RNU6-1321P-201ENST00000390905 107 ntBASIC2.29□□□□□ -2.04
SOX1O00570 MIR548G-201ENST00000408442 89 ntBASIC2.29□□□□□ -2.04
SOX1O00570 Y_RNA.620-201ENST00000411009 88 ntBASIC2.29□□□□□ -2.04
SOX1O00570 SUMO1P4-201ENST00000429430 302 ntBASIC2.29□□□□□ -2.04
SOX1O00570 RNU6-267P-201ENST00000516714 103 ntBASIC2.29□□□□□ -2.04
SOX1O00570 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
SOX1O00570 MIR5588-201ENST00000581890 63 ntBASIC2.29□□□□□ -2.04
SOX1O00570 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
SOX1O00570 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
SOX1O00570 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
SOX1O00570 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
SOX1O00570 RNU7-48P-201ENST00000458875 63 ntBASIC2.28□□□□□ -2.04
SOX1O00570 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.28□□□□□ -2.04
SOX1O00570 RNU7-41P-201ENST00000515917 61 ntBASIC2.28□□□□□ -2.04
SOX1O00570 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.28□□□□□ -2.04
SOX1O00570 MIR4303-201ENST00000581299 66 ntBASIC2.28□□□□□ -2.04
SOX1O00570 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SOX1O00570 AC105081.1-201ENST00000617727 106 ntBASIC2.28□□□□□ -2.04
SOX1O00570 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.28□□□□□ -2.04
SOX1O00570 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SOX1O00570 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SOX1O00570 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SOX1O00570 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SOX1O00570 RNY1P4-201ENST00000384595 115 ntBASIC2.27□□□□□ -2.05
SOX1O00570 MIR1255A-201ENST00000408338 113 ntBASIC2.27□□□□□ -2.05
SOX1O00570 AL161935.2-201ENST00000414627 60 ntBASIC2.27□□□□□ -2.05
SOX1O00570 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.27□□□□□ -2.05
SOX1O00570 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
SOX1O00570 RNA5SP200-201ENST00000516360 103 ntBASIC2.27□□□□□ -2.05
SOX1O00570 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.27□□□□□ -2.05
SOX1O00570 Y_RNA.783-201ENST00000613546 102 ntBASIC2.27□□□□□ -2.05
SOX1O00570 ZNF355P-201ENST00000427301 3216 ntBASIC2.27□□□□□ -2.05
SOX1O00570 RNY1P13-201ENST00000365030 105 ntBASIC2.26□□□□□ -2.05
SOX1O00570 RNA5SP259-201ENST00000365541 109 ntBASIC2.26□□□□□ -2.05
SOX1O00570 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
SOX1O00570 RNA5SP237-201ENST00000410414 113 ntBASIC2.26□□□□□ -2.05
SOX1O00570 JTBP1-201ENST00000441314 247 ntBASIC2.26□□□□□ -2.05
SOX1O00570 SPINT5P-201ENST00000448174 155 ntBASIC2.26□□□□□ -2.05
SOX1O00570 RNU7-171P-201ENST00000459581 62 ntBASIC2.26□□□□□ -2.05
SOX1O00570 RNA5SP395-201ENST00000516567 118 ntBASIC2.26□□□□□ -2.05
SOX1O00570 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
SOX1O00570 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SOX1O00570 RNU6-1244P-201ENST00000363614 108 ntBASIC2.25□□□□□ -2.05
SOX1O00570 Y_RNA.191-201ENST00000363972 113 ntBASIC2.25□□□□□ -2.05
SOX1O00570 MIR513A1-201ENST00000385138 129 ntBASIC2.25□□□□□ -2.05
SOX1O00570 AC009474.2-201ENST00000451383 136 ntBASIC2.25□□□□□ -2.05
SOX1O00570 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
SOX1O00570 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
SOX1O00570 SEPT14P17-201ENST00000617978 177 ntBASIC2.25□□□□□ -2.05
SOX1O00570 MIR6734-201ENST00000621166 68 ntBASIC2.25□□□□□ -2.05
SOX1O00570 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
SOX1O00570 AC010297.1-201ENST00000623948 149 ntBASIC2.25□□□□□ -2.05
SOX1O00570 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SOX1O00570 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
SOX1O00570 RNA5SP48-201ENST00000363969 126 ntBASIC2.24□□□□□ -2.05
SOX1O00570 Y_RNA.426-201ENST00000384068 113 ntBASIC2.24□□□□□ -2.05
SOX1O00570 RNU1-98P-201ENST00000458992 160 ntBASIC2.24□□□□□ -2.05
SOX1O00570 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
SOX1O00570 AC141846.1-201ENST00000568348 142 ntBASIC2.24□□□□□ -2.05
SOX1O00570 MIR4666B-201ENST00000578142 81 ntBASIC2.24□□□□□ -2.05
SOX1O00570 MIR4452-201ENST00000583004 71 ntBASIC2.24□□□□□ -2.05
SOX1O00570 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.24□□□□□ -2.05
SOX1O00570 AC012676.2-201ENST00000619258 186 ntBASIC2.24□□□□□ -2.05
SOX1O00570 AP001362.1-201ENST00000625165 124 ntBASIC2.24□□□□□ -2.05
SOX1O00570 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SOX1O00570 Y_RNA.173-201ENST00000363776 113 ntBASIC2.23□□□□□ -2.05
SOX1O00570 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
SOX1O00570 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
SOX1O00570 MTND5P40-201ENST00000559945 246 ntBASIC2.23□□□□□ -2.05
SOX1O00570 MIR3670-2-201ENST00000582974 65 ntBASIC2.23□□□□□ -2.05
SOX1O00570 MIR3670-1-201ENST00000584160 65 ntBASIC2.23□□□□□ -2.05
SOX1O00570 MIR3670-3-201ENST00000584855 65 ntBASIC2.23□□□□□ -2.05
SOX1O00570 AL078603.1-201ENST00000603824 313 ntBASIC2.23□□□□□ -2.05
SOX1O00570 MIR3670-4-201ENST00000612260 65 ntBASIC2.23□□□□□ -2.05
SOX1O00570 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
SOX1O00570 AC025521.1-201ENST00000621624 286 ntBASIC2.23□□□□□ -2.05
SOX1O00570 SNORA67.1-201ENST00000364749 141 ntBASIC2.22□□□□□ -2.05
SOX1O00570 RNU6-787P-201ENST00000384032 107 ntBASIC2.22□□□□□ -2.05
SOX1O00570 SNORD23.1-201ENST00000408212 104 ntBASIC2.22□□□□□ -2.05
SOX1O00570 RNA5SP225-201ENST00000410874 135 ntBASIC2.22□□□□□ -2.05
SOX1O00570 AC003989.2-201ENST00000440224 169 ntBASIC2.22□□□□□ -2.05
SOX1O00570 SNORA25.15-201ENST00000516487 89 ntBASIC2.22□□□□□ -2.05
SOX1O00570 AC133485.1-201ENST00000567176 124 ntBASIC2.22□□□□□ -2.05
SOX1O00570 AL357312.1-201ENST00000603879 298 ntBASIC2.22□□□□□ -2.05
SOX1O00570 PRELID3BP2-201ENST00000605362 201 ntBASIC2.22□□□□□ -2.05
SOX1O00570 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.21□□□□□ -2.06
SOX1O00570 RNU6-1125P-201ENST00000363601 107 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 280.2 ms