Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 Gm6296-201ENSMUST00000222599 943 ntBASIC20.57■□□□□ 0.88
U2surpQ6NV83 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.56■□□□□ 0.88
U2surpQ6NV83 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.56■□□□□ 0.88
U2surpQ6NV83 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Haglr-201ENSMUST00000100000 2085 ntBASIC20.56■□□□□ 0.88
U2surpQ6NV83 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.56■□□□□ 0.88
U2surpQ6NV83 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2surpQ6NV83 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.55■□□□□ 0.88
U2surpQ6NV83 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
U2surpQ6NV83 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2surpQ6NV83 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Gm4459-201ENSMUST00000118750 468 ntBASIC20.54■□□□□ 0.88
U2surpQ6NV83 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Gm6376-201ENSMUST00000209407 580 ntBASIC20.54■□□□□ 0.88
U2surpQ6NV83 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2surpQ6NV83 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
U2surpQ6NV83 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.53■□□□□ 0.88
U2surpQ6NV83 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.53■□□□□ 0.88
U2surpQ6NV83 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2surpQ6NV83 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.52■□□□□ 0.88
U2surpQ6NV83 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Rps4l-201ENSMUST00000071745 943 ntBASIC20.52■□□□□ 0.88
U2surpQ6NV83 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
U2surpQ6NV83 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
U2surpQ6NV83 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
U2surpQ6NV83 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
U2surpQ6NV83 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2surpQ6NV83 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2surpQ6NV83 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
U2surpQ6NV83 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2surpQ6NV83 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2surpQ6NV83 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms