Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Uspl1Q3ULM6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Gm18622-201ENSMUST00000219361 595 ntBASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uspl1Q3ULM6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uspl1Q3ULM6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Gm8655-201ENSMUST00000221159 852 ntBASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uspl1Q3ULM6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Gm43347-201ENSMUST00000200226 580 ntBASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Uspl1Q3ULM6 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Gm6296-201ENSMUST00000222599 943 ntBASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uspl1Q3ULM6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.58■□□□□ 0.89
Uspl1Q3ULM6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms