Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC23.69■■□□□ 1.38
NclP09405 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NclP09405 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NclP09405 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
NclP09405 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NclP09405 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
NclP09405 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NclP09405 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NclP09405 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NclP09405 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC23.68■■□□□ 1.38
NclP09405 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC23.68■■□□□ 1.38
NclP09405 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC23.68■■□□□ 1.38
NclP09405 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NclP09405 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NclP09405 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NclP09405 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
NclP09405 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
NclP09405 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC23.67■■□□□ 1.38
NclP09405 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
NclP09405 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
NclP09405 Gm43548-201ENSMUST00000197139 2353 ntBASIC23.67■■□□□ 1.38
NclP09405 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
NclP09405 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
NclP09405 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NclP09405 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
NclP09405 AC154527.4-201ENSMUST00000224364 1667 ntBASIC23.67■■□□□ 1.38
NclP09405 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Haglr-201ENSMUST00000100000 2085 ntBASIC23.66■■□□□ 1.38
NclP09405 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC23.66■■□□□ 1.38
NclP09405 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC23.66■■□□□ 1.38
NclP09405 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Gm15743-202ENSMUST00000182690 1901 ntBASIC23.66■■□□□ 1.38
NclP09405 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NclP09405 Gm37500-201ENSMUST00000192059 1443 ntBASIC23.66■■□□□ 1.38
NclP09405 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
NclP09405 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
NclP09405 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NclP09405 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Gm4609-201ENSMUST00000106443 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm5138-201ENSMUST00000113842 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm15191-201ENSMUST00000117933 1000 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm12182-201ENSMUST00000118655 1008 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm13882-201ENSMUST00000120886 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm10284-201ENSMUST00000145057 1005 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm10481-201ENSMUST00000179228 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm2574-201ENSMUST00000181051 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm3200-201ENSMUST00000181493 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm8825-201ENSMUST00000182565 998 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm4518-201ENSMUST00000182638 718 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm8330-201ENSMUST00000182754 1008 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm4575-201ENSMUST00000182991 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm8709-201ENSMUST00000183230 1012 ntBASIC23.65■■□□□ 1.38
NclP09405 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC23.65■■□□□ 1.38
NclP09405 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Gm10293-201ENSMUST00000076317 1002 ntBASIC23.65■■□□□ 1.38
NclP09405 Gm6316-201ENSMUST00000082064 1020 ntBASIC23.65■■□□□ 1.38
NclP09405 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC23.65■■□□□ 1.38
NclP09405 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NclP09405 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NclP09405 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NclP09405 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NclP09405 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NclP09405 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.38
NclP09405 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NclP09405 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
NclP09405 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC23.64■■□□□ 1.37
NclP09405 Gm6550-201ENSMUST00000187574 993 ntBASIC23.64■■□□□ 1.37
NclP09405 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NclP09405 AV026068-213ENSMUST00000223675 1171 ntBASIC23.64■■□□□ 1.37
NclP09405 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NclP09405 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NclP09405 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms