Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-1336P-201ENST00000383886 109 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 RNU6-42P-201ENST00000384165 107 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 MT-TF-201ENST00000387314 71 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 RNU6-1149P-201ENST00000516810 97 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 RNU6-388P-201ENST00000517012 105 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 RNU6-389P-201ENST00000517048 105 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 AC022559.1-201ENST00000520905 205 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 AC020891.4-201ENST00000605745 93 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 AC141273.2-201ENST00000618989 130 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 Y_RNA.515-201ENST00000384535 112 ntBASIC0.69□□□□□ -2.3
LDB1Q86U70 MIR520H-201ENST00000385126 88 ntBASIC0.69□□□□□ -2.3
LDB1Q86U70 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
LDB1Q86U70 AC021613.1-201ENST00000623880 111 ntBASIC0.69□□□□□ -2.3
LDB1Q86U70 Y_RNA.233-201ENST00000364407 101 ntBASIC0.68□□□□□ -2.3
LDB1Q86U70 Y_RNA.297-201ENST00000364950 91 ntBASIC0.68□□□□□ -2.3
LDB1Q86U70 Y_RNA.393-201ENST00000383936 102 ntBASIC0.68□□□□□ -2.3
LDB1Q86U70 MT-TG-201ENST00000387429 68 ntBASIC0.68□□□□□ -2.3
LDB1Q86U70 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
LDB1Q86U70 MIR938-201ENST00000401216 83 ntBASIC0.68□□□□□ -2.3
LDB1Q86U70 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
LDB1Q86U70 AC107027.2-201ENST00000512197 115 ntBASIC0.68□□□□□ -2.3
LDB1Q86U70 MIR30D-201ENST00000362283 70 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 Y_RNA.355-201ENST00000365462 98 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 Y_RNA.476-201ENST00000384347 108 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 Y_RNA.508-201ENST00000384502 114 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 MIR1257-201ENST00000408490 117 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 RNU7-56P-201ENST00000458744 62 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 RNU6-893P-201ENST00000458841 100 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 RNU6-1219P-201ENST00000516143 112 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 AC072026.1-201ENST00000605023 201 ntBASIC0.67□□□□□ -2.3
LDB1Q86U70 MTND5P32-201ENST00000560711 1802 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LDB1Q86U70 SNORA22.1-201ENST00000362701 134 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 Y_RNA.337-201ENST00000365312 102 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 MIR125B2-201ENST00000385128 89 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 Y_RNA.644-201ENST00000459006 113 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 Y_RNA.674-201ENST00000516362 113 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 MIR6841-201ENST00000637129 72 ntBASIC0.66□□□□□ -2.3
LDB1Q86U70 RNU6-364P-201ENST00000384387 107 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 Y_RNA.552-201ENST00000384665 112 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 RNU6-768P-201ENST00000384683 107 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 RNA5SP237-201ENST00000410414 113 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 Y_RNA.793-201ENST00000411222 111 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.65□□□□□ -2.31
LDB1Q86U70 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 AL662814.1-201ENST00000617364 121 ntBASIC0.65□□□□□ -2.31
LDB1Q86U70 Y_RNA.118-201ENST00000363300 101 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU4-16P-201ENST00000364737 141 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-1237P-201ENST00000384777 107 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-447P-201ENST00000410293 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-1118P-201ENST00000410382 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-1076P-201ENST00000410397 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-355P-201ENST00000410427 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-791P-201ENST00000410467 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-705P-201ENST00000410601 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-1100P-201ENST00000410691 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-860P-201ENST00000410860 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-1217P-201ENST00000411276 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 RNU6-785P-201ENST00000411324 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 snoU13.18-201ENST00000459483 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
LDB1Q86U70 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 U6.90-201ENST00000614007 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 U6.70-201ENST00000620287 104 ntBASIC0.64□□□□□ -2.31
LDB1Q86U70 Y_RNA.52-201ENST00000362760 96 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 Y_RNA.357-201ENST00000365487 109 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 RNY1P6-201ENST00000384193 109 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 RPL39P25-201ENST00000449384 154 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 RNU6-138P-201ENST00000515952 107 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 RNU7-156P-201ENST00000517214 74 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 AP002392.1-201ENST00000537692 208 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.63□□□□□ -2.31
LDB1Q86U70 RNU6-1082P-201ENST00000364574 107 ntBASIC0.62□□□□□ -2.31
LDB1Q86U70 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
LDB1Q86U70 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
LDB1Q86U70 SNORA75.5-201ENST00000391291 81 ntBASIC0.62□□□□□ -2.31
LDB1Q86U70 SNORD92-201ENST00000585078 85 ntBASIC0.62□□□□□ -2.31
LDB1Q86U70 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
LDB1Q86U70 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
LDB1Q86U70 RNU6-200P-201ENST00000364743 107 ntBASIC0.61□□□□□ -2.31
LDB1Q86U70 RNU6-818P-201ENST00000364837 108 ntBASIC0.61□□□□□ -2.31
LDB1Q86U70 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
LDB1Q86U70 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.61□□□□□ -2.31
LDB1Q86U70 SNORD93-201ENST00000408813 74 ntBASIC0.61□□□□□ -2.31
LDB1Q86U70 RNU7-102P-201ENST00000458948 62 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms