Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MTND3P8-201ENST00000412909 339 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 Z95118.1-201ENST00000421372 247 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 AC096644.2-201ENST00000429278 159 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.68□□□□□ -2.68
TPM4P67936 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 MTND5P40-201ENST00000559945 246 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 YWHAEP2-201ENST00000580066 112 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 MIR548AE1-201ENST00000583292 70 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 AC097639.2-201ENST00000603159 172 ntBASIC-1.68□□□□□ -2.68
TPM4P67936 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.69□□□□□ -2.68
TPM4P67936 RNU6-484P-201ENST00000384016 107 ntBASIC-1.69□□□□□ -2.68
TPM4P67936 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.69□□□□□ -2.68
TPM4P67936 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.69□□□□□ -2.68
TPM4P67936 MTND1P34-201ENST00000438556 671 ntBASIC-1.69□□□□□ -2.68
TPM4P67936 SNORA13-201ENST00000458790 133 ntBASIC-1.69□□□□□ -2.68
TPM4P67936 RNA5SP153-201ENST00000516498 76 ntBASIC-1.69□□□□□ -2.68
TPM4P67936 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 RNU6-901P-201ENST00000384593 106 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 MIR526A2-201ENST00000390198 65 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 SEPT14P8-201ENST00000508026 178 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 SCARNA17-201ENST00000516183 144 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 RNU7-137P-201ENST00000516788 62 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
TPM4P67936 C8orf59P2-201ENST00000603441 271 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 SNORD113-5-201ENST00000607261 78 ntBASIC-1.7□□□□□ -2.68
TPM4P67936 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.71□□□□□ -2.68
TPM4P67936 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 MIR5688-201ENST00000580619 83 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.71□□□□□ -2.68
TPM4P67936 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 RNU6-310P-201ENST00000384655 107 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 MIR181A1-201ENST00000385026 110 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 SNORA53-201ENST00000391141 249 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 RNU2-16P-201ENST00000410712 136 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 AC099799.1-201ENST00000439809 192 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 AC093423.1-201ENST00000440817 142 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 SPINT5P-201ENST00000448174 155 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 SNORA27.4-201ENST00000516650 95 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 AC040926.1-201ENST00000530195 238 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 AC024909.2-201ENST00000553035 286 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 AL121655.1-201ENST00000605811 308 ntBASIC-1.72□□□□□ -2.68
TPM4P67936 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 RNU6-890P-201ENST00000384121 107 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 RNU6-154P-201ENST00000384306 106 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.73□□□□□ -2.69
TPM4P67936 RNU7-70P-201ENST00000516941 66 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 AC078883.4-201ENST00000623218 367 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 MIR3974-201ENST00000637126 96 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 MTND5P18-201ENST00000445624 1801 ntBASIC-1.73□□□□□ -2.69
TPM4P67936 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 RNA5SP368-201ENST00000364298 116 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 MRPS35P2-201ENST00000508242 191 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 MIR3129-201ENST00000581095 76 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 AC007485.1-201ENST00000616755 206 ntBASIC-1.74□□□□□ -2.69
TPM4P67936 SNORD114-10-201ENST00000363409 72 ntBASIC-1.75□□□□□ -2.69
TPM4P67936 SNORD95.1-201ENST00000364099 68 ntBASIC-1.75□□□□□ -2.69
TPM4P67936 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.75□□□□□ -2.69
TPM4P67936 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.75□□□□□ -2.69
TPM4P67936 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.75□□□□□ -2.69
TPM4P67936 MIR519A1-201ENST00000385257 85 ntBASIC-1.75□□□□□ -2.69
TPM4P67936 SNORD67.1-201ENST00000516618 108 ntBASIC-1.75□□□□□ -2.69
TPM4P67936 RNU6-502P-201ENST00000362419 108 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 RNU4-16P-201ENST00000364737 141 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 MIR519E-201ENST00000385075 84 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 snoU13.13-201ENST00000458842 104 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 AP000676.1-201ENST00000533307 52 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 MIR3179-1-201ENST00000578940 84 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 MIR3179-2-201ENST00000579107 84 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 MIR3179-3-201ENST00000579566 84 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 MIR4499-201ENST00000584834 69 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 MIR3179-4-201ENST00000617599 84 ntBASIC-1.76□□□□□ -2.69
TPM4P67936 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.77□□□□□ -2.69
TPM4P67936 RNU4-14P-201ENST00000410858 122 ntBASIC-1.77□□□□□ -2.69
TPM4P67936 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.77□□□□□ -2.69
TPM4P67936 PMCHL1-202ENST00000423102 261 ntBASIC-1.77□□□□□ -2.69
TPM4P67936 AL359881.1-201ENST00000602916 267 ntBASIC-1.77□□□□□ -2.69
TPM4P67936 AC145423.2-201ENST00000610631 239 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms