Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
YBX1P67809 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
YBX1P67809 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
YBX1P67809 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.09□□□□□ -2.07
YBX1P67809 RNU6-228P-201ENST00000362700 106 ntBASIC2.09□□□□□ -2.07
YBX1P67809 Y_RNA.247-201ENST00000364500 92 ntBASIC2.09□□□□□ -2.07
YBX1P67809 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
YBX1P67809 Y_RNA.354-201ENST00000365448 111 ntBASIC2.09□□□□□ -2.07
YBX1P67809 RNU6-813P-201ENST00000384691 107 ntBASIC2.09□□□□□ -2.07
YBX1P67809 AC090844.1-201ENST00000422019 156 ntBASIC2.09□□□□□ -2.07
YBX1P67809 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
YBX1P67809 MIR4439-201ENST00000583746 80 ntBASIC2.09□□□□□ -2.07
YBX1P67809 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
YBX1P67809 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
YBX1P67809 RNU6-1276P-201ENST00000365372 104 ntBASIC2.08□□□□□ -2.08
YBX1P67809 MIR206-201ENST00000384872 86 ntBASIC2.08□□□□□ -2.08
YBX1P67809 U8.15-201ENST00000390947 134 ntBASIC2.08□□□□□ -2.08
YBX1P67809 RNU6-1086P-201ENST00000410930 100 ntBASIC2.08□□□□□ -2.08
YBX1P67809 UBL5P1-201ENST00000507979 193 ntBASIC2.08□□□□□ -2.08
YBX1P67809 RNU6-1053P-201ENST00000515930 101 ntBASIC2.08□□□□□ -2.08
YBX1P67809 RNU7-43P-201ENST00000516554 64 ntBASIC2.08□□□□□ -2.08
YBX1P67809 AP000942.3-201ENST00000603702 160 ntBASIC2.08□□□□□ -2.08
YBX1P67809 RNU6-86P-201ENST00000606534 107 ntBASIC2.08□□□□□ -2.08
YBX1P67809 AC008133.2-201ENST00000624540 351 ntBASIC2.08□□□□□ -2.08
YBX1P67809 MIR3202-2-201ENST00000635980 79 ntBASIC2.08□□□□□ -2.08
YBX1P67809 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
YBX1P67809 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
YBX1P67809 WWP1P1-201ENST00000466609 2769 ntBASIC2.07□□□□□ -2.08
YBX1P67809 MIR520C-201ENST00000385005 87 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RNA5SP212-201ENST00000391223 107 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RNA5SP225-201ENST00000410874 135 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RNA5SP100-201ENST00000410903 110 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RNA5SP59-201ENST00000410922 110 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RPS29P28-201ENST00000446439 141 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
YBX1P67809 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RNU6-267P-201ENST00000516714 103 ntBASIC2.07□□□□□ -2.08
YBX1P67809 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.07□□□□□ -2.08
YBX1P67809 RNU7-35P-201ENST00000517174 62 ntBASIC2.07□□□□□ -2.08
YBX1P67809 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
YBX1P67809 MIR4498-201ENST00000577599 66 ntBASIC2.07□□□□□ -2.08
YBX1P67809 MIR4764-201ENST00000580680 88 ntBASIC2.07□□□□□ -2.08
YBX1P67809 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.07□□□□□ -2.08
YBX1P67809 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.07□□□□□ -2.08
YBX1P67809 MIR8065-201ENST00000620577 100 ntBASIC2.07□□□□□ -2.08
YBX1P67809 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.07□□□□□ -2.08
YBX1P67809 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
YBX1P67809 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
YBX1P67809 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
YBX1P67809 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
YBX1P67809 SNORD38.1-201ENST00000363863 68 ntBASIC2.06□□□□□ -2.08
YBX1P67809 RNU6-675P-201ENST00000384236 104 ntBASIC2.06□□□□□ -2.08
YBX1P67809 Y_RNA.508-201ENST00000384502 114 ntBASIC2.06□□□□□ -2.08
YBX1P67809 MIR1255A-201ENST00000408338 113 ntBASIC2.06□□□□□ -2.08
YBX1P67809 RNU7-79P-201ENST00000516082 62 ntBASIC2.06□□□□□ -2.08
YBX1P67809 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
YBX1P67809 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
YBX1P67809 CYP3A52P-201ENST00000563326 91 ntBASIC2.06□□□□□ -2.08
YBX1P67809 AC103810.7-201ENST00000607821 91 ntBASIC2.06□□□□□ -2.08
YBX1P67809 Z97988.1-201ENST00000637697 135 ntBASIC2.06□□□□□ -2.08
YBX1P67809 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
YBX1P67809 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
YBX1P67809 Y_RNA.118-201ENST00000363300 101 ntBASIC2.05□□□□□ -2.08
YBX1P67809 Y_RNA.140-201ENST00000363474 103 ntBASIC2.05□□□□□ -2.08
YBX1P67809 SNORD116-10-201ENST00000363791 102 ntBASIC2.05□□□□□ -2.08
YBX1P67809 RNU6-865P-201ENST00000364772 107 ntBASIC2.05□□□□□ -2.08
YBX1P67809 SNORD58A-201ENST00000383875 65 ntBASIC2.05□□□□□ -2.08
YBX1P67809 Y_RNA.448-201ENST00000384185 108 ntBASIC2.05□□□□□ -2.08
YBX1P67809 RNY1P4-201ENST00000384595 115 ntBASIC2.05□□□□□ -2.08
YBX1P67809 RNU6-1237P-201ENST00000384777 107 ntBASIC2.05□□□□□ -2.08
YBX1P67809 MIR34C-201ENST00000384831 77 ntBASIC2.05□□□□□ -2.08
YBX1P67809 RNU6-1307P-201ENST00000391012 103 ntBASIC2.05□□□□□ -2.08
YBX1P67809 RNU6-602P-201ENST00000411155 105 ntBASIC2.05□□□□□ -2.08
YBX1P67809 RNA5SP450-201ENST00000411206 102 ntBASIC2.05□□□□□ -2.08
YBX1P67809 SNORD67.1-201ENST00000516618 108 ntBASIC2.05□□□□□ -2.08
YBX1P67809 SNORA31.17-201ENST00000516953 127 ntBASIC2.05□□□□□ -2.08
YBX1P67809 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
YBX1P67809 MIR4668-201ENST00000582284 70 ntBASIC2.05□□□□□ -2.08
YBX1P67809 RNU6-360P-201ENST00000390944 104 ntBASIC2.04□□□□□ -2.08
YBX1P67809 RNU6-1006P-201ENST00000516998 103 ntBASIC2.04□□□□□ -2.08
YBX1P67809 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
YBX1P67809 MIR5588-201ENST00000581890 63 ntBASIC2.04□□□□□ -2.08
YBX1P67809 AC105081.1-201ENST00000617727 106 ntBASIC2.04□□□□□ -2.08
YBX1P67809 RNU6-1123P-201ENST00000362347 106 ntBASIC2.03□□□□□ -2.08
YBX1P67809 RNU6-1163P-201ENST00000364516 107 ntBASIC2.03□□□□□ -2.08
YBX1P67809 RNU6-219P-201ENST00000364728 107 ntBASIC2.03□□□□□ -2.08
YBX1P67809 RNU6-203P-201ENST00000384038 104 ntBASIC2.03□□□□□ -2.08
YBX1P67809 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.03□□□□□ -2.08
YBX1P67809 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
YBX1P67809 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
YBX1P67809 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.03□□□□□ -2.08
YBX1P67809 SNRPGP19-201ENST00000603826 189 ntBASIC2.03□□□□□ -2.08
YBX1P67809 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
YBX1P67809 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
YBX1P67809 RNA5SP138-201ENST00000365098 114 ntBASIC2.02□□□□□ -2.09
YBX1P67809 Y_RNA.620-201ENST00000411009 88 ntBASIC2.02□□□□□ -2.09
YBX1P67809 RPL31P63-201ENST00000422565 375 ntBASIC2.02□□□□□ -2.09
YBX1P67809 SPINT5P-201ENST00000448174 155 ntBASIC2.02□□□□□ -2.09
YBX1P67809 RNA5SP445-201ENST00000515889 115 ntBASIC2.02□□□□□ -2.09
YBX1P67809 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms