Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNU7-45P-201ENST00000459460 63 ntBASIC0.79□□□□□ -2.28
ABCD3P28288 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
ABCD3P28288 MIR4676-201ENST00000583078 72 ntBASIC0.79□□□□□ -2.28
ABCD3P28288 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
ABCD3P28288 AC072026.1-201ENST00000605023 201 ntBASIC0.79□□□□□ -2.28
ABCD3P28288 AC021613.1-201ENST00000623880 111 ntBASIC0.79□□□□□ -2.28
ABCD3P28288 Y_RNA.476-201ENST00000384347 108 ntBASIC0.78□□□□□ -2.28
ABCD3P28288 SNORD12C-201ENST00000386307 89 ntBASIC0.78□□□□□ -2.28
ABCD3P28288 MIR4804-201ENST00000581683 73 ntBASIC0.78□□□□□ -2.28
ABCD3P28288 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 Y_RNA.274-201ENST00000364714 101 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 Y_RNA.297-201ENST00000364950 91 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 Y_RNA.337-201ENST00000365312 102 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 MIR938-201ENST00000401216 83 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 MIR1257-201ENST00000408490 117 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 AC244098.3-201ENST00000424803 96 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 Y_RNA.644-201ENST00000459006 113 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 Y_RNA.674-201ENST00000516362 113 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 MIR6841-201ENST00000637129 72 ntBASIC0.77□□□□□ -2.29
ABCD3P28288 RNU6-379P-201ENST00000363813 104 ntBASIC0.76□□□□□ -2.29
ABCD3P28288 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
ABCD3P28288 MIR598-201ENST00000384868 97 ntBASIC0.76□□□□□ -2.29
ABCD3P28288 MIR520H-201ENST00000385126 88 ntBASIC0.76□□□□□ -2.29
ABCD3P28288 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
ABCD3P28288 RNA5SP237-201ENST00000410414 113 ntBASIC0.76□□□□□ -2.29
ABCD3P28288 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCD3P28288 uc_338.6-201ENST00000613544 171 ntBASIC0.76□□□□□ -2.29
ABCD3P28288 AC023934.1-201ENST00000574529 2389 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ABCD3P28288 SNORA22.1-201ENST00000362701 134 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 MIR573-201ENST00000384964 99 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 Y_RNA.793-201ENST00000411222 111 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 RNU7-185P-201ENST00000459215 60 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 COX6CP6-201ENST00000490840 228 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 RNU6-1219P-201ENST00000516143 112 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 AC020891.4-201ENST00000605745 93 ntBASIC0.75□□□□□ -2.29
ABCD3P28288 MTND5P32-201ENST00000560711 1802 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 MIR30D-201ENST00000362283 70 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 RNU4-45P-201ENST00000365469 141 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 Y_RNA.357-201ENST00000365487 109 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 RNU6-342P-201ENST00000384521 104 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 MIR125B2-201ENST00000385128 89 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 Y_RNA.700-201ENST00000516806 100 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 RNA5SP480-201ENST00000516840 109 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.74□□□□□ -2.29
ABCD3P28288 AP002392.1-201ENST00000537692 208 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 AL662814.1-201ENST00000617364 121 ntBASIC0.74□□□□□ -2.29
ABCD3P28288 RNU6-200P-201ENST00000364743 107 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 RNY1P6-201ENST00000384193 109 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 RNU6-768P-201ENST00000384683 107 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 MIR7-2-201ENST00000384970 110 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 SNORA75.5-201ENST00000391291 81 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 AC015818.7-201ENST00000428754 109 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 AC087499.7-201ENST00000441958 109 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 RPL39P25-201ENST00000449384 154 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 RNU7-56P-201ENST00000458744 62 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 MIR3646-201ENST00000578301 84 ntBASIC0.73□□□□□ -2.29
ABCD3P28288 Y_RNA.52-201ENST00000362760 96 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-818P-201ENST00000364837 108 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-364P-201ENST00000384387 107 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-447P-201ENST00000410293 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-1118P-201ENST00000410382 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-1076P-201ENST00000410397 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-355P-201ENST00000410427 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-791P-201ENST00000410467 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-705P-201ENST00000410601 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-1100P-201ENST00000410691 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-860P-201ENST00000410860 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-1217P-201ENST00000411276 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 RNU6-785P-201ENST00000411324 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 U6.90-201ENST00000614007 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 U6.70-201ENST00000620287 104 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 AC078938.1-201ENST00000620993 318 ntBASIC0.72□□□□□ -2.29
ABCD3P28288 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.72□□□□□ -2.29
ABCD3P28288 Y_RNA.36-201ENST00000362602 112 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 SNORD114-26-201ENST00000363543 72 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 RNU6-239P-201ENST00000390990 99 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 RNU6-388P-201ENST00000517012 105 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 RNU6-389P-201ENST00000517048 105 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 SNORD92-201ENST00000585078 85 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.71□□□□□ -2.3
ABCD3P28288 Y_RNA.540-201ENST00000384638 111 ntBASIC0.7□□□□□ -2.3
ABCD3P28288 MTATP6P21-201ENST00000440681 189 ntBASIC0.7□□□□□ -2.3
ABCD3P28288 AC022559.1-201ENST00000520905 205 ntBASIC0.7□□□□□ -2.3
ABCD3P28288 MIR6844-201ENST00000637122 62 ntBASIC0.7□□□□□ -2.3
ABCD3P28288 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
ABCD3P28288 RNU6-1318P-201ENST00000365389 103 ntBASIC0.69□□□□□ -2.3
ABCD3P28288 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
ABCD3P28288 RNU7-120P-201ENST00000459334 63 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms