Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 SNORA24-201ENST00000384096 131 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 RNU6-321P-201ENST00000410912 106 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 AC004965.1-201ENST00000413033 213 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 RNU6-958P-201ENST00000516995 106 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 RNU6-158P-201ENST00000517104 100 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 MIR3126-201ENST00000577443 74 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 MIR548AE2-201ENST00000583456 67 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 MIR3660-201ENST00000584845 100 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.59□□□□□ -2.15
SNHG28P0DPA3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
SNHG28P0DPA3 RNU6-363P-201ENST00000362895 105 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU6-1113P-201ENST00000384348 107 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 MIR29C-201ENST00000385231 88 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU6-747P-201ENST00000390928 104 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU6-241P-201ENST00000391148 104 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU6-644P-201ENST00000391155 98 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 AL034345.1-201ENST00000407768 123 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU6-177P-201ENST00000411257 104 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 AL035398.1-201ENST00000430869 322 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU6-893P-201ENST00000458841 100 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 AC107297.1-201ENST00000459991 176 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNU7-61P-201ENST00000515897 61 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 DEFB131E-201ENST00000532329 154 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 MIR4299-201ENST00000577899 72 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 MIR4777-201ENST00000583710 86 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 SNORA28-201ENST00000606769 126 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 MIR4791-201ENST00000607666 84 ntBASIC1.58□□□□□ -2.16
SNHG28P0DPA3 SNORD115-2-201ENST00000362842 82 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.93-201ENST00000363066 109 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 SNORD115-20-201ENST00000365099 82 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 RNU6-203P-201ENST00000384038 104 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 MIR759-201ENST00000390224 91 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.593-201ENST00000410292 98 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 RNA5SP100-201ENST00000410903 110 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 RNA5SP59-201ENST00000410922 110 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 PGBD4P5-201ENST00000445958 426 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 SNORD123-201ENST00000459473 70 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 AC004223.1-201ENST00000479840 271 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 AC108729.3-201ENST00000513484 108 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 SCARNA23-201ENST00000516060 130 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 RNU6-162P-201ENST00000516228 103 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.57□□□□□ -2.16
SNHG28P0DPA3 AL020996.3-201ENST00000606617 222 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 MIR6717-201ENST00000622747 73 ntBASIC1.57□□□□□ -2.16
SNHG28P0DPA3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
SNHG28P0DPA3 RNU6-832P-201ENST00000363319 107 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.558-201ENST00000384685 113 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 SNORA7.5-201ENST00000410672 110 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.56□□□□□ -2.16
SNHG28P0DPA3 AC090844.1-201ENST00000422019 156 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 RNU7-34P-201ENST00000459394 64 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.56□□□□□ -2.16
SNHG28P0DPA3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 AC026421.1-201ENST00000519101 163 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 MIR1245B-201ENST00000636115 69 ntBASIC1.56□□□□□ -2.16
SNHG28P0DPA3 SNORA22.1-201ENST00000362701 134 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 RNU6-170P-201ENST00000362832 104 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 RNU4-67P-201ENST00000364569 141 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 RNU6-342P-201ENST00000384521 104 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 MIR520A-201ENST00000384862 85 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 MIR660-201ENST00000385235 97 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SNHG28P0DPA3 MIR1912-201ENST00000410389 80 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 AL022718.1-201ENST00000412004 84 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 RNU7-113P-201ENST00000459273 62 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.55□□□□□ -2.16
SNHG28P0DPA3 UBL5P1-201ENST00000507979 193 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 RNU6-917P-201ENST00000516294 104 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.55□□□□□ -2.16
SNHG28P0DPA3 MIR8055-201ENST00000610739 97 ntBASIC1.55□□□□□ -2.16
SNHG28P0DPA3 MIR494-201ENST00000349529 81 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNU6-392P-201ENST00000364926 101 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 SNORA32-201ENST00000384072 121 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.467-201ENST00000384297 102 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNU6-1152P-201ENST00000384576 107 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 MIR136-201ENST00000385207 82 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNU6-1275P-201ENST00000391087 107 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 Y_RNA.601-201ENST00000410500 113 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 RNU7-67P-201ENST00000459003 62 ntBASIC1.54□□□□□ -2.16
SNHG28P0DPA3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms