Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC097639.2-201ENST00000603159 172 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 AL670379.3-201ENST00000605040 251 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 AC037487.3-201ENST00000606668 112 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 RNA5SP133-201ENST00000363368 119 ntBASIC-0.43□□□□□ -2.48
UPK1BO75841 RNU6-326P-201ENST00000365480 107 ntBASIC-0.43□□□□□ -2.48
UPK1BO75841 RNU6-211P-201ENST00000384047 107 ntBASIC-0.43□□□□□ -2.48
UPK1BO75841 MTND4LP30-201ENST00000454092 297 ntBASIC-0.43□□□□□ -2.48
UPK1BO75841 MIR3925-201ENST00000584674 77 ntBASIC-0.43□□□□□ -2.48
UPK1BO75841 AL442067.1-201ENST00000613261 223 ntBASIC-0.43□□□□□ -2.48
UPK1BO75841 AL162376.1-201ENST00000624117 175 ntBASIC-0.43□□□□□ -2.48
UPK1BO75841 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 RNU4-16P-201ENST00000364737 141 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 SNORA63.7-201ENST00000365579 123 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 MIR106A-201ENST00000384870 81 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 MIR489-201ENST00000384923 84 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 MIR5706-201ENST00000579841 80 ntBASIC-0.44□□□□□ -2.48
UPK1BO75841 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.44□□□□□ -2.48
UPK1BO75841 MIR101-2-201ENST00000362195 79 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU4-58P-201ENST00000363192 141 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNA5SP275-201ENST00000363936 118 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU6-702P-201ENST00000364982 107 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 SNORA22B-201ENST00000383876 138 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 AL606845.1-201ENST00000404881 255 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNA5SP127-201ENST00000411051 133 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU7-79P-201ENST00000516082 62 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU6-180P-201ENST00000516697 61 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU6-453P-201ENST00000516819 85 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 RNU7-70P-201ENST00000516941 66 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 U6.109-201ENST00000636749 87 ntBASIC-0.45□□□□□ -2.48
UPK1BO75841 SNORA18.1-201ENST00000363418 128 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 AC096531.1-201ENST00000419107 107 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.46□□□□□ -2.48
UPK1BO75841 MTND4P19-201ENST00000446659 478 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 RNU7-104P-201ENST00000459398 79 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 RNU7-161P-201ENST00000517289 62 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 RNU2-60P-201ENST00000517290 128 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.46□□□□□ -2.48
UPK1BO75841 MIR4677-201ENST00000584153 80 ntBASIC-0.46□□□□□ -2.48
UPK1BO75841 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.47□□□□□ -2.48
UPK1BO75841 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.47□□□□□ -2.48
UPK1BO75841 RNY3P5-201ENST00000384127 102 ntBASIC-0.47□□□□□ -2.48
UPK1BO75841 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
UPK1BO75841 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
UPK1BO75841 RPL21P38-201ENST00000418090 167 ntBASIC-0.47□□□□□ -2.48
UPK1BO75841 FGF7P4-201ENST00000509595 295 ntBASIC-0.47□□□□□ -2.48
UPK1BO75841 U7.6-201ENST00000610841 64 ntBASIC-0.47□□□□□ -2.48
UPK1BO75841 MIR6514-201ENST00000622549 70 ntBASIC-0.47□□□□□ -2.48
UPK1BO75841 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.48□□□□□ -2.49
UPK1BO75841 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.48□□□□□ -2.49
UPK1BO75841 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.48□□□□□ -2.49
UPK1BO75841 RNU6-823P-201ENST00000391042 103 ntBASIC-0.48□□□□□ -2.49
UPK1BO75841 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.48□□□□□ -2.49
UPK1BO75841 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.48□□□□□ -2.49
UPK1BO75841 AL109933.3-201ENST00000619095 188 ntBASIC-0.48□□□□□ -2.49
UPK1BO75841 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 AC244505.6-201ENST00000452829 130 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 RNU6-561P-201ENST00000516222 102 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 SNORA40.15-201ENST00000516884 107 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 AC138749.4-201ENST00000563970 127 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.49□□□□□ -2.49
UPK1BO75841 UBE2WP1-201ENST00000362030 340 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 RNU4-73P-201ENST00000363164 141 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 RNU6-806P-201ENST00000365147 105 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 MIR1252-201ENST00000408861 65 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 RBMX2P4-201ENST00000441256 376 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 MIR378D2-201ENST00000580636 98 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 uc_338.28-201ENST00000612082 187 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 AC139792.2-201ENST00000624218 587 ntBASIC-0.5□□□□□ -2.49
UPK1BO75841 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
UPK1BO75841 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 RNU6-46P-201ENST00000383860 107 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 RNU4-70P-201ENST00000384579 139 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 ELOCP20-201ENST00000422460 345 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 AC082651.2-201ENST00000496833 166 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 RNY3P15-201ENST00000516297 97 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 AL360085.1-201ENST00000604713 532 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 AC011921.3-201ENST00000605540 361 ntBASIC-0.51□□□□□ -2.49
UPK1BO75841 MIR8064-201ENST00000612863 90 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms