Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNA5SP163-201ENST00000410304 99 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 RNU6-121P-201ENST00000410525 99 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 AC244505.6-201ENST00000452829 130 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 RNU6-897P-201ENST00000517135 105 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 MIR3925-201ENST00000584674 77 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 AC006006.1-201ENST00000603082 144 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 AC006157.1-201ENST00000611750 366 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 U6atac.1-201ENST00000616025 117 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 AC021613.1-201ENST00000623880 111 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.51□□□□□ -2.49
LSM1O15116 RNU6-320P-201ENST00000516511 106 ntBASIC-0.51□□□□□ -2.49
LSM1O15116 uc_338.28-201ENST00000612082 187 ntBASIC-0.51□□□□□ -2.49
LSM1O15116 UBE2WP1-201ENST00000362030 340 ntBASIC-0.52□□□□□ -2.49
LSM1O15116 RNA5SP257-201ENST00000363023 116 ntBASIC-0.52□□□□□ -2.49
LSM1O15116 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.52□□□□□ -2.49
LSM1O15116 RNU6-46P-201ENST00000383860 107 ntBASIC-0.52□□□□□ -2.49
LSM1O15116 AC090574.1-201ENST00000623186 233 ntBASIC-0.52□□□□□ -2.49
LSM1O15116 AC112487.2-201ENST00000637950 304 ntBASIC-0.52□□□□□ -2.49
LSM1O15116 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.53□□□□□ -2.49
LSM1O15116 SNORA20-201ENST00000384662 132 ntBASIC-0.53□□□□□ -2.49
LSM1O15116 RNU6-531P-201ENST00000516694 104 ntBASIC-0.53□□□□□ -2.49
LSM1O15116 IGLVI-20-201ENST00000519296 130 ntBASIC-0.53□□□□□ -2.49
LSM1O15116 MIR4677-201ENST00000584153 80 ntBASIC-0.53□□□□□ -2.49
LSM1O15116 U7.6-201ENST00000610841 64 ntBASIC-0.53□□□□□ -2.49
LSM1O15116 SNORA25.1-201ENST00000362326 128 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 SNORD115-24-201ENST00000363528 82 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 RNU6-702P-201ENST00000364982 107 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 SNORA22B-201ENST00000383876 138 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.54□□□□□ -2.5
LSM1O15116 RNU7-161P-201ENST00000517289 62 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 AL365205.2-201ENST00000594586 68 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.54□□□□□ -2.5
LSM1O15116 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.55□□□□□ -2.5
LSM1O15116 RNU4-58P-201ENST00000363192 141 ntBASIC-0.55□□□□□ -2.5
LSM1O15116 MIR7-2-201ENST00000384970 110 ntBASIC-0.55□□□□□ -2.5
LSM1O15116 MT-TT-201ENST00000387460 66 ntBASIC-0.55□□□□□ -2.5
LSM1O15116 MIR378D2-201ENST00000580636 98 ntBASIC-0.55□□□□□ -2.5
LSM1O15116 MIR3129-201ENST00000581095 76 ntBASIC-0.55□□□□□ -2.5
LSM1O15116 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.55□□□□□ -2.5
LSM1O15116 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 RNU6-211P-201ENST00000384047 107 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 SNORD41.1-201ENST00000391000 69 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 SNORA53-201ENST00000391141 249 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 RNU7-35P-201ENST00000517174 62 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 AC138749.4-201ENST00000563970 127 ntBASIC-0.56□□□□□ -2.5
LSM1O15116 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 RNA5SP403-201ENST00000363598 108 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 RNA5SP275-201ENST00000363936 118 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 RBMX2P4-201ENST00000441256 376 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 RNU7-79P-201ENST00000516082 62 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 MTND5P32-201ENST00000560711 1802 ntBASIC-0.57□□□□□ -2.5
LSM1O15116 RNU6-923P-201ENST00000364753 107 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 SNORD114-12-201ENST00000365400 75 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 MTND4P19-201ENST00000446659 478 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 RNA5SP285-201ENST00000516619 119 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 CR383656.4-201ENST00000546909 122 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 MIR4645-201ENST00000583158 77 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 AL442067.1-201ENST00000613261 223 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 AC073869.9-201ENST00000641610 120 ntBASIC-0.58□□□□□ -2.5
LSM1O15116 RNA5SP133-201ENST00000363368 119 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 RNU6-823P-201ENST00000391042 103 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 SNORA75.1-201ENST00000391130 148 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 MIR876-201ENST00000401147 81 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 MIR1252-201ENST00000408861 65 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 AC096531.1-201ENST00000419107 107 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.59□□□□□ -2.5
LSM1O15116 RNU2-60P-201ENST00000517290 128 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 AC037487.3-201ENST00000606668 112 ntBASIC-0.59□□□□□ -2.5
LSM1O15116 MIR148A-201ENST00000362215 68 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 MIR106A-201ENST00000384870 81 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 MIR616-201ENST00000385293 97 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
LSM1O15116 AL606845.1-201ENST00000404881 255 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 AC109327.2-201ENST00000448339 378 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 RNU6-893P-201ENST00000458841 100 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 RNU6-453P-201ENST00000516819 85 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 SCARNA15-202ENST00000516881 127 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 DEFB131E-201ENST00000532329 154 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 AL670379.3-201ENST00000605040 251 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 AC011921.3-201ENST00000605540 361 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 MIR3666-201ENST00000607845 111 ntBASIC-0.6□□□□□ -2.51
LSM1O15116 SNORD114-31-201ENST00000363219 75 ntBASIC-0.61□□□□□ -2.51
LSM1O15116 MIR6514-201ENST00000622549 70 ntBASIC-0.61□□□□□ -2.51
LSM1O15116 MIR6759-201ENST00000638110 65 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 396.2 ms