Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
FOXN3O00409 RNU6-113P-201ENST00000516653 101 ntBASIC1.46□□□□□ -2.18
FOXN3O00409 AL670379.3-201ENST00000605040 251 ntBASIC1.46□□□□□ -2.18
FOXN3O00409 U6.95-201ENST00000636931 70 ntBASIC1.46□□□□□ -2.18
FOXN3O00409 Y_RNA.330-201ENST00000365230 109 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 SNORA70.7-201ENST00000384159 133 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 RNU6-1144P-201ENST00000384247 104 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 Y_RNA.563-201ENST00000384707 108 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 MT-TI-201ENST00000387365 69 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 AC009474.2-201ENST00000451383 136 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
FOXN3O00409 SNORA70.22-201ENST00000517160 124 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 MIR4305-201ENST00000583252 102 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 AC021613.1-201ENST00000623880 111 ntBASIC1.45□□□□□ -2.18
FOXN3O00409 Y_RNA.35-201ENST00000362601 101 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 Y_RNA.298-201ENST00000364960 107 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 Y_RNA.346-201ENST00000365385 112 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 RNU6-939P-201ENST00000384634 107 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 RNU6-1104P-201ENST00000384723 104 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 RNU6-321P-201ENST00000410912 106 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.44□□□□□ -2.18
FOXN3O00409 AL035461.1-201ENST00000421490 332 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
FOXN3O00409 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.44□□□□□ -2.18
FOXN3O00409 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
FOXN3O00409 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
FOXN3O00409 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 Y_RNA.171-201ENST00000363760 102 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 Y_RNA.226-201ENST00000364337 114 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 SNORD116-21-201ENST00000384507 92 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 RNA5SP144-201ENST00000410846 116 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 AL512326.2-201ENST00000426359 151 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXN3O00409 AP003716.2-201ENST00000528260 108 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 DNAJC19P9-201ENST00000555084 351 ntBASIC1.43□□□□□ -2.18
FOXN3O00409 Y_RNA.81-201ENST00000362997 102 ntBASIC1.42□□□□□ -2.18
FOXN3O00409 RNA5SP264-201ENST00000363115 107 ntBASIC1.42□□□□□ -2.18
FOXN3O00409 RNU7-53P-201ENST00000516705 60 ntBASIC1.42□□□□□ -2.18
FOXN3O00409 RNU6-1258P-201ENST00000516911 111 ntBASIC1.42□□□□□ -2.18
FOXN3O00409 MIR548AO-201ENST00000579992 96 ntBASIC1.42□□□□□ -2.18
FOXN3O00409 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
FOXN3O00409 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXN3O00409 SNORA25-201ENST00000384384 134 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 Y_RNA.549-201ENST00000384657 102 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 POLR2J4-204ENST00000418424 324 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 RNU7-73P-201ENST00000458743 63 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 snoU13.16-201ENST00000459350 104 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 RNU7-40P-201ENST00000516397 64 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 RNU6-919P-201ENST00000516731 104 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 PRELID3BP2-201ENST00000605362 201 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 AL359821.1-201ENST00000605519 182 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 AL020996.3-201ENST00000606617 222 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 AL035470.1-201ENST00000622571 220 ntBASIC1.41□□□□□ -2.18
FOXN3O00409 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXN3O00409 SNORA22.1-201ENST00000362701 134 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 Y_RNA.363-201ENST00000365529 113 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 SNORA22-201ENST00000383907 134 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 SNORA26.6-201ENST00000391256 115 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 RNA5SP136-201ENST00000410906 107 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 AL022718.1-201ENST00000412004 84 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 AC090844.1-201ENST00000422019 156 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 COX6CP6-201ENST00000490840 228 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 MIR6717-201ENST00000622747 73 ntBASIC1.4□□□□□ -2.19
FOXN3O00409 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
FOXN3O00409 RNU6-834P-201ENST00000362367 110 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 SNORA63.5-201ENST00000363548 123 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 SNORA1.1-201ENST00000364671 133 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 Y_RNA.470-201ENST00000384307 117 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 RNY4P18-201ENST00000391107 89 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 AC004223.1-201ENST00000479840 271 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 TRMT112P2-201ENST00000512910 132 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 RNU11-2P-201ENST00000516898 142 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 AC004812.1-201ENST00000540773 146 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.39□□□□□ -2.19
FOXN3O00409 AC008163.1-202ENST00000636004 2889 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 Y_RNA.198-201ENST00000364013 98 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 Y_RNA.213-201ENST00000364178 111 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 SNORA32-201ENST00000384072 121 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU6-880P-201ENST00000384526 107 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU6-1319P-201ENST00000390855 104 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU6-747P-201ENST00000390928 104 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU6-241P-201ENST00000391148 104 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 MIR1287-201ENST00000408492 90 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 MIR1185-1-201ENST00000408598 86 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU6-177P-201ENST00000411257 104 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU7-113P-201ENST00000459273 62 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU6-589P-201ENST00000516485 107 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 Y_RNA.709-201ENST00000516952 92 ntBASIC1.38□□□□□ -2.19
FOXN3O00409 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms