Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RNU6-1165P-201ENST00000410119 107 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-177P-201ENST00000411257 104 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU7-80P-201ENST00000459562 61 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-977P-201ENST00000516411 103 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR3149-201ENST00000584629 83 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR302B-201ENST00000362188 73 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.75-201ENST00000362927 97 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 RNA5SP325-201ENST00000363756 130 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.182-201ENST00000363880 111 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 SNORA20.1-201ENST00000364790 130 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-643P-201ENST00000384018 107 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.430-201ENST00000384081 110 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-463P-201ENST00000384340 107 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR520F-201ENST00000384824 87 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 MRPS18CP4-201ENST00000535821 231 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 U6.106-201ENST00000636360 105 ntBASIC0.57□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.412-201ENST00000384001 104 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.454-201ENST00000384224 113 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU4-70P-201ENST00000384579 139 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR573-201ENST00000384964 99 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR520H-201ENST00000385126 88 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR624-201ENST00000385217 97 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 SEPT7P4-201ENST00000437076 306 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 AC243829.3-201ENST00000622177 108 ntBASIC0.56□□□□□ -2.32
NEDD8-MDP1E9PL57 AL596211.1-201ENST00000569873 2277 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-597P-201ENST00000365620 102 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.435-201ENST00000384095 112 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 RNA5SP127-201ENST00000411051 133 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU7-185P-201ENST00000459215 60 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR1273G-201ENST00000577677 100 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR6841-201ENST00000637129 72 ntBASIC0.55□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-47P-201ENST00000383866 107 ntBASIC0.54□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR125B2-201ENST00000385128 89 ntBASIC0.54□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR938-201ENST00000401216 83 ntBASIC0.54□□□□□ -2.32
NEDD8-MDP1E9PL57 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
NEDD8-MDP1E9PL57 RNA5SP261-201ENST00000410536 106 ntBASIC0.54□□□□□ -2.32
NEDD8-MDP1E9PL57 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.54□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR411-201ENST00000362239 96 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.144-201ENST00000363521 113 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 Y_RNA.200-201ENST00000364018 102 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 AL078595.1-201ENST00000404458 226 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 RNA5SP222-201ENST00000411039 105 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR3152-201ENST00000579801 74 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 AC008608.1-201ENST00000603910 127 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 AC009779.6-201ENST00000603972 165 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 AL589743.1-201ENST00000551932 2712 ntBASIC0.53□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-1336P-201ENST00000383886 109 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 MT-TF-201ENST00000387314 71 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1149P-201ENST00000516810 97 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 MIR4431-201ENST00000579990 94 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 SNORD92-201ENST00000585078 85 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 AL162730.1-201ENST00000605734 292 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 AC021613.1-201ENST00000623880 111 ntBASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
NEDD8-MDP1E9PL57 Y_RNA.83-201ENST00000363005 113 ntBASIC0.51□□□□□ -2.33
NEDD8-MDP1E9PL57 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
NEDD8-MDP1E9PL57 MTND5P32-201ENST00000560711 1802 ntBASIC0.51□□□□□ -2.33
NEDD8-MDP1E9PL57 AC130289.1-201ENST00000577321 73 ntBASIC0.51□□□□□ -2.33
NEDD8-MDP1E9PL57 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
NEDD8-MDP1E9PL57 AC090897.1-201ENST00000580909 226 ntBASIC0.51□□□□□ -2.33
NEDD8-MDP1E9PL57 MIR18A-201ENST00000362310 71 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 SNORA25.7-201ENST00000364375 127 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 SNORD100-201ENST00000408573 76 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU7-102P-201ENST00000458948 62 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU7-156P-201ENST00000517214 74 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 Z83818.1-201ENST00000603584 150 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 AL662814.1-201ENST00000617364 121 ntBASIC0.5□□□□□ -2.33
NEDD8-MDP1E9PL57 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 SNORA22.1-201ENST00000362701 134 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 MIR1257-201ENST00000408490 117 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-447P-201ENST00000410293 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1118P-201ENST00000410382 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1076P-201ENST00000410397 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-355P-201ENST00000410427 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-791P-201ENST00000410467 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-705P-201ENST00000410601 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1100P-201ENST00000410691 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-860P-201ENST00000410860 104 ntBASIC0.49□□□□□ -2.33
NEDD8-MDP1E9PL57 RNU6-1217P-201ENST00000411276 104 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms