Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC022523.2-201ENST00000561045 150 ntBASIC1.92□□□□□ -2.1
CTDP1Q9Y5B0 AC243994.1-201ENST00000618627 109 ntBASIC1.92□□□□□ -2.1
CTDP1Q9Y5B0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.92□□□□□ -2.1
CTDP1Q9Y5B0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-1107P-201ENST00000364817 104 ntBASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 RNA5SP144-201ENST00000410846 116 ntBASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 RNU2-13P-201ENST00000515909 113 ntBASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 MIR3152-201ENST00000579801 74 ntBASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 MIR4791-201ENST00000607666 84 ntBASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CTDP1Q9Y5B0 Y_RNA.85-201ENST00000363014 111 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.116-201ENST00000363292 103 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 SNORA63.5-201ENST00000363548 123 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-147P-201ENST00000383983 107 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 SNORA24-201ENST00000384096 131 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 MIR194-1-201ENST00000384892 85 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 MT-TI-201ENST00000387365 69 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 BTF3P4-201ENST00000418852 495 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-917P-201ENST00000516294 104 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-970P-201ENST00000516312 107 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 MIR4498-201ENST00000577599 66 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 MIR4679-2-201ENST00000578358 77 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 MIR3163-201ENST00000581592 73 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 AL035470.1-201ENST00000622571 220 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 AL589743.1-201ENST00000551932 2712 ntBASIC1.9□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-1319P-201ENST00000390855 104 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-747P-201ENST00000390928 104 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-241P-201ENST00000391148 104 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNU4-62P-201ENST00000410125 130 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNA5SP261-201ENST00000410536 106 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-177P-201ENST00000411257 104 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-893P-201ENST00000458841 100 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNU7-43P-201ENST00000516554 64 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 AC024614.2-201ENST00000577584 372 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 MIR3613-201ENST00000579844 87 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 uc_338.28-201ENST00000612082 187 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 AC095038.3-201ENST00000634439 195 ntBASIC1.89□□□□□ -2.11
CTDP1Q9Y5B0 RNA5SP259-201ENST00000365541 109 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 SNORA51.10-201ENST00000384418 136 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 AL512326.2-201ENST00000426359 151 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 AC245517.4-201ENST00000448601 281 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 AL031737.1-201ENST00000450125 223 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 RNU7-73P-201ENST00000458743 63 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-322P-201ENST00000516010 103 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 AC004812.1-201ENST00000540773 146 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 MIR4255-201ENST00000579351 72 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 snoU13.31-201ENST00000607291 104 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 AL512598.1-201ENST00000610158 273 ntBASIC1.88□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.49-201ENST00000362714 112 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 MIR513A1-201ENST00000385138 129 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-913P-201ENST00000390913 95 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 SNORA67.6-201ENST00000391093 99 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 POLR2J4-204ENST00000418424 324 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 RNU7-6P-201ENST00000516845 62 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 MIR4764-201ENST00000580680 88 ntBASIC1.87□□□□□ -2.11
CTDP1Q9Y5B0 MIR450A1-201ENST00000362262 91 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 SNORA22.1-201ENST00000362701 134 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 MIR548D2-201ENST00000384955 97 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 MIR520C-201ENST00000385005 87 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 RNU7-113P-201ENST00000459273 62 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 AL020996.3-201ENST00000606617 222 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 MIR6717-201ENST00000622747 73 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 AC008133.2-201ENST00000624540 351 ntBASIC1.86□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-106P-201ENST00000384405 107 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 AL451046.2-201ENST00000403074 277 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 AL161935.2-201ENST00000414627 60 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 RNU1-98P-201ENST00000458992 160 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 snoU13.16-201ENST00000459350 104 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 RPS23P4-201ENST00000487908 423 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 BX248123.2-201ENST00000606318 124 ntBASIC1.85□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.163-201ENST00000363702 113 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-1014P-201ENST00000383940 103 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 RNU6-997P-201ENST00000384725 107 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 MIR653-201ENST00000385279 96 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 SNORA26.6-201ENST00000391256 115 ntBASIC1.84□□□□□ -2.11
CTDP1Q9Y5B0 MIR1302-5-201ENST00000408164 150 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms