Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 SNORD115-2-201ENST00000362842 82 ntBASIC2.66□□□□□ -1.98
ATG3Q9NT62 Y_RNA.247-201ENST00000364500 92 ntBASIC2.66□□□□□ -1.98
ATG3Q9NT62 Y_RNA.299-201ENST00000364973 94 ntBASIC2.66□□□□□ -1.98
ATG3Q9NT62 SNORD115-20-201ENST00000365099 82 ntBASIC2.66□□□□□ -1.98
ATG3Q9NT62 SNORD23.1-201ENST00000408212 104 ntBASIC2.66□□□□□ -1.98
ATG3Q9NT62 RNU2-40P-201ENST00000410833 196 ntBASIC2.66□□□□□ -1.98
ATG3Q9NT62 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.66□□□□□ -1.98
ATG3Q9NT62 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.66□□□□□ -1.98
ATG3Q9NT62 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.66□□□□□ -1.98
ATG3Q9NT62 SNORD115-3-201ENST00000363100 82 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 Y_RNA.140-201ENST00000363474 103 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 Y_RNA.191-201ENST00000363972 113 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 RNU6-1296P-201ENST00000383879 107 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 RNY1P4-201ENST00000384595 115 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 RNU6-1319P-201ENST00000390855 104 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 RNU6-747P-201ENST00000390928 104 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 RNU6-241P-201ENST00000391148 104 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 RNU6-177P-201ENST00000411257 104 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 AC011753.1-201ENST00000451001 220 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 RNU6-1018P-201ENST00000516577 106 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 MIR6841-201ENST00000637129 72 ntBASIC2.65□□□□□ -1.99
ATG3Q9NT62 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
ATG3Q9NT62 MIR29C-201ENST00000385231 88 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 SNORA26.6-201ENST00000391256 115 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 MIR1267-201ENST00000408723 78 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 RNU6-1190P-201ENST00000410811 104 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 RNA5SP33-201ENST00000516687 98 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 AC006160.2-201ENST00000637708 154 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 AP000553.5-201ENST00000641933 54 ntBASIC2.64□□□□□ -1.99
ATG3Q9NT62 SNORD58A-201ENST00000383875 65 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 MIR518A2-201ENST00000384966 87 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 SNORA40.18-201ENST00000391200 128 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 U8.16-201ENST00000391279 133 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 HSPE1P9-201ENST00000440046 311 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 UBL5P1-201ENST00000507979 193 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 MIR5002-201ENST00000584713 97 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 MIR376B-201ENST00000614515 100 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 AC027279.3-201ENST00000625055 122 ntBASIC2.63□□□□□ -1.99
ATG3Q9NT62 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ATG3Q9NT62 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ATG3Q9NT62 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
ATG3Q9NT62 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ATG3Q9NT62 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ATG3Q9NT62 Y_RNA.4-201ENST00000362333 112 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 RNU6-1313P-201ENST00000362622 102 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 SNORA22.1-201ENST00000362701 134 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 Y_RNA.338-201ENST00000365320 114 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 RNU6-24P-201ENST00000384440 107 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 MIR583-201ENST00000384846 75 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 U8.15-201ENST00000390947 134 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 AC104435.1-201ENST00000483483 166 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 RNA5SP182-201ENST00000516064 82 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.62□□□□□ -1.99
ATG3Q9NT62 MIR6895-201ENST00000613497 78 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 AL512310.12-203ENST00000640543 90 ntBASIC2.62□□□□□ -1.99
ATG3Q9NT62 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.61□□□□□ -1.99
ATG3Q9NT62 SNORA32-201ENST00000384072 121 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 SNORA17.3-201ENST00000391159 129 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 Y_RNA.611-201ENST00000410682 108 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 AC090844.1-201ENST00000422019 156 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.61□□□□□ -1.99
ATG3Q9NT62 RNU7-34P-201ENST00000459394 64 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 RNU2-19P-201ENST00000517288 84 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG3Q9NT62 MIR4529-201ENST00000578110 78 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 MIR5694-201ENST00000581190 76 ntBASIC2.61□□□□□ -1.99
ATG3Q9NT62 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG3Q9NT62 RNU6-652P-201ENST00000365488 107 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 Y_RNA.426-201ENST00000384068 113 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 RNU6-1307P-201ENST00000391012 103 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 AC055731.1-201ENST00000474387 401 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 AC108729.3-201ENST00000513484 108 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 RNU6-958P-201ENST00000516995 106 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 RNU6-1006P-201ENST00000516998 103 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 RNU6-86P-201ENST00000606534 107 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 MIR548BB-201ENST00000626714 66 ntBASIC2.6□□□□□ -1.99
ATG3Q9NT62 Y_RNA.96-201ENST00000363092 109 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 RNU6-23P-201ENST00000363283 107 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 RNU6-1163P-201ENST00000364516 107 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 SNORA16B-201ENST00000364674 135 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 RNU6-424P-201ENST00000384367 105 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 MIR516B2-201ENST00000385190 85 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 RNU6-913P-201ENST00000390913 95 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 SNORD77B-201ENST00000391112 67 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 AC019129.1-201ENST00000403786 261 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG3Q9NT62 BX510359.4-201ENST00000423750 193 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 HMGN2P38-201ENST00000423806 265 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 SNRPGP19-201ENST00000603826 189 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 MIR4791-201ENST00000607666 84 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 AC103810.7-201ENST00000607821 91 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 SEPT14P17-201ENST00000617978 177 ntBASIC2.59□□□□□ -1.99
ATG3Q9NT62 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ATG3Q9NT62 RNU6-833P-201ENST00000363486 107 ntBASIC2.58□□□□□ -2
ATG3Q9NT62 Y_RNA.164-201ENST00000363709 102 ntBASIC2.58□□□□□ -2
ATG3Q9NT62 SNORD116-10-201ENST00000363791 102 ntBASIC2.58□□□□□ -2
ATG3Q9NT62 SNORA1.1-201ENST00000364671 133 ntBASIC2.58□□□□□ -2
ATG3Q9NT62 MIR1283-2-201ENST00000408621 87 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms